Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:aucubin
go back to main search page
Accession:CHEBI:69796 term browser browse the term
Definition:An organic molecular entity that has formula C15H22O9.
Synonyms:related_synonym: (1S,4aR,5S,7aS)-5-Hydroxy-7-(hydroxymethyl)-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-1-yl beta-D-glucopyranoside;   Formula=C15H22O9;   InChI=1S/C15H22O9/c16-4-6-3-8(18)7-1-2-22-14(10(6)7)24-15-13(21)12(20)11(19)9(5-17)23-15/h1-3,7-21H,4-5H2/t7-,8+,9+,10+,11+,12-,13+,14-,15-/m0/s1;   InChIKey=RJWJHRPNHPHBRN-FKVJWERZSA-N;   Rhinanthin;   SMILES=[H][C@]1(O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O)O[C@@H]1OC=C[C@@]2([H])[C@H](O)C=C(CO)[C@@]12[H]
 alt_id: CHEBI:2919
 xref: CAS:479-98-1;   KEGG:C09771;   KNApSAcK:C00003073
 xref_mesh: MESH:C006650
 xref: PMID:21568305


show annotations for term's descendants           Sort by:
 
aucubin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 increases phosphorylation
multiple interactions
ISO aucubin results in increased phosphorylation of AKT1 protein
aucubin inhibits the reaction [Cisplatin results in increased phosphorylation of AKT1 protein]
CTD PMID:29408431 PMID:32504734 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Bglap bone gamma-carboxyglutamate protein increases expression ISO aucubin results in increased expression of BGLAP protein CTD PMID:29408431 NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495
JBrowse link
G Bmp2 bone morphogenetic protein 2 increases expression ISO aucubin results in increased expression of BMP2 protein CTD PMID:29408431 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Casp3 caspase 3 multiple interactions ISO aucubin inhibits the reaction [Cisplatin results in increased cleavage of CASP3 protein] CTD PMID:32504734 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Casp9 caspase 9 multiple interactions ISO aucubin inhibits the reaction [Cisplatin results in increased cleavage of CASP9 protein] CTD PMID:32504734 NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A multiple interactions ISO aucubin inhibits the reaction [Cisplatin results in increased expression of CDKN1A protein] CTD PMID:32504734 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
JBrowse link
G Foxo3 forkhead box O3 multiple interactions ISO aucubin inhibits the reaction [Cisplatin results in increased expression of and results in increased phosphorylation of FOXO3 protein] CTD PMID:32504734 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
JBrowse link
G Hmox1 heme oxygenase 1 multiple interactions ISO aucubin inhibits the reaction [Cisplatin results in increased expression of HMOX1 protein] CTD PMID:32504734 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Itgb1 integrin subunit beta 1 increases expression ISO aucubin results in increased expression of ITGB1 protein CTD PMID:29408431 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Mapk1 mitogen activated protein kinase 1 increases phosphorylation
multiple interactions
ISO aucubin results in increased phosphorylation of MAPK1 protein
aucubin inhibits the reaction [Cisplatin results in increased phosphorylation of MAPK1 protein]
CTD PMID:29408431 PMID:32504734 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
JBrowse link
G Mapk14 mitogen activated protein kinase 14 increases phosphorylation ISO aucubin results in increased phosphorylation of MAPK14 protein CTD PMID:29408431 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Mapk3 mitogen activated protein kinase 3 increases phosphorylation
multiple interactions
ISO aucubin results in increased phosphorylation of MAPK3 protein
aucubin inhibits the reaction [Cisplatin results in increased phosphorylation of MAPK3 protein]
CTD PMID:29408431 PMID:32504734 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Mtor mechanistic target of rapamycin kinase increases phosphorylation ISO aucubin results in increased phosphorylation of MTOR protein CTD PMID:29408431 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 multiple interactions ISO aucubin inhibits the reaction [Cisplatin results in increased cleavage of PARP1 protein] CTD PMID:32504734 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit multiple interactions ISO aucubin inhibits the reaction [Cisplatin results in increased expression of RELA protein] CTD PMID:32504734 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 increases phosphorylation ISO aucubin results in increased phosphorylation of RPS6KB1 protein CTD PMID:29408431 NCBI chr10:71,323,777...71,367,908
Ensembl chr10:71,323,777...71,367,908
JBrowse link
G Smad1 SMAD family member 1 increases expression ISO aucubin results in increased expression of SMAD1 protein CTD PMID:29408431 NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651
JBrowse link
G Smad5 SMAD family member 5 increases expression ISO aucubin results in increased expression of SMAD5 protein CTD PMID:29408431 NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634
JBrowse link
G Smad9 SMAD family member 9 increases expression ISO aucubin results in increased expression of SMAD9 protein CTD PMID:29408431 NCBI chr 2:138,956,326...139,006,315
Ensembl chr 2:138,986,471...139,006,307
JBrowse link
G Sp7 Sp7 transcription factor increases expression ISO aucubin results in increased expression of SP7 protein CTD PMID:29408431 NCBI chr 7:133,484,609...133,494,788
Ensembl chr 7:133,484,609...133,494,847
JBrowse link
G Spp1 secreted phosphoprotein 1 increases expression ISO aucubin results in increased expression of SPP1 protein CTD PMID:29408431 NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162
JBrowse link
G Stat3 signal transducer and activator of transcription 3 multiple interactions ISO aucubin inhibits the reaction [Cisplatin results in increased phosphorylation of STAT3 protein] CTD PMID:32504734 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
JBrowse link
G Tnf tumor necrosis factor multiple interactions ISO aucubin inhibits the reaction [Cisplatin results in increased expression of TNF protein] CTD PMID:32504734 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19821
    role 19769
      biological role 19769
        biochemical role 19389
          metabolite 19364
            aucubin 23
              agnuside 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19821
    subatomic particle 19819
      composite particle 19819
        hadron 19819
          baryon 19819
            nucleon 19819
              atomic nucleus 19819
                atom 19819
                  main group element atom 19716
                    p-block element atom 19716
                      p-block molecular entity 19716
                        carbon group molecular entity 19640
                          organic molecular entity 19630
                            aucubin 23
                              agnuside 0
paths to the root