Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:beta-D-QuiN4Fm-(1->4)-alpha-D-GalNAcAN-(1->4)-alpha-D-GalNAcAN-(1->3)-beta-D-QuiNAc-(1->2)-beta-D-QuiN4Fm-(1->4)-alpha-D-GalNAcAN-(1->4)-alpha-D-GalNAcAN-(1->3)-beta-D-QuiNAc-(1->4)-[alpha-D-GalN-(1->2)]-[alpha-D-Glc-(1->3)]-beta-D-Man-(1->4)-[beta-D-Glc-(1->2)]-alpha-D-Man-(1->5)-alpha-Kdo
go back to main search page
Accession:CHEBI:68424 term browser browse the term
Definition:An amino oligosaccharide that is a branched tetradecasaccharide derivative comprised of a mannose residue to which is linked an N-acetylgalactosaminyl residue at O-2, a glucosyl residue at O-3 and a beta-D-QuiN4Fm-(1->4)-alpha-D-GalNAcAN-(1->2)-alpha-D-GalNAcAN-(1->3)-beta-D-QuiNAc-(1->2)-beta-D-QuiN4Fm-(1->4)-alpha-D-GalNAcAN-(1->4)-alpha-D-GalNAcAN-(1->3)-beta-D-QuiNAc octasaccharide chain at O-4, all linked to an [alpha-D-Glc-(1->2)]-alpha-D-Man-(1->5)-alpha-Kdo branched trisaccharide unit.
Synonyms:exact_synonym: 4,6-dideoxy-4-formamido-beta-D-glucopyranosyl-(1->4)-2-acetamido-2-deoxy-alpha-D-galactopyranuronamidyl-(1->4)-2-acetamido-2-deoxy-alpha-D-galactopyranuronamidyl-(1->3)-2-acetamido-2,6-dideoxy-beta-D-glucopyranosyl-(1->2)-4,6-dideoxy-4-formamido-beta-D-glucopyranosyl-(1->4)-2-acetamido-2-deoxy-alpha-D-galactopyranuronamidyl-(1->4)-2-acetamido-2-deoxy-alpha-D-galactopyranuronamidyl-(1->3)-2-acetamido-2,6-dideoxy-beta-D-glucopyranosyl-(1->4)-[2-deoxy-2-amino-alpha-D-galactopyranosyl-(1->2)]-[alpha-D-glucopyranosyl-(1->3)]-beta-D-mannopyranosyl-(1->4)-[beta-D-glucopyranosyl-(1->2)]-alpha-D-mannopyranosyl-(1->5)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid
 related_synonym: 4,6-dideoxy-4-formamido-beta-D-glucosyl-(1->4)-2-acetamido-2-deoxy-alpha-D-galacturonamidyl-(1->4)-2-acetamido-2-deoxy-alpha-D-galacturonamidyl-(1->3)-2-acetamido-2,6-dideoxy-beta-D-glucosyl-(1->2)-4,6-dideoxy-4-formamido-beta-D-glucosyl-(1->4)-2-acetamido-2-deoxy-alpha-D-galacturonamidyl-(1->4)-2-acetamido-2-deoxy-alpha-D-galacturonamidyl-(1->3)-2-acetamido-2,6-dideoxy-beta-D-glucosyl-(1->4)-[2-deoxy-2-amino-alpha-D-galactosyl-(1->2)]-[alpha-D-glucosyl-(1->3)]-beta-D-mannosyl-(1->4)-[beta-D-glucosyl-(1->2)]-alpha-D-mannosyl-(1->5)-3-deoxy-alpha-D-manno-oct-2-ulosonic acid;   Formula=C100H161N13O68;   InChI=1S/C100H161N13O68/c1-20-38(106-18-120)52(136)60(144)93(155-20)171-72-56(140)42(110-26(7)124)89(178-79(72)84(104)150)169-70-55(139)41(109-25(6)123)88(177-77(70)82(102)148)168-69-45(113-29(10)127)92(158-23(4)47(69)131)173-74-53(137)39(107-19-121)21(2)156-96(74)172-73-57(141)43(111-27(8)125)90(179-80(73)85(105)151)170-71-54(138)40(108-24(5)122)87(176-78(71)83(103)149)167-68-44(112-28(9)126)91(157-22(3)46(68)130)166-67-36(17-119)163-98(81(180-86-37(101)51(135)48(132)32(13-115)159-86)76(67)175-95-62(146)59(143)50(134)34(15-117)161-95)165-66-35(16-118)162-97(75(63(66)147)174-94-61(145)58(142)49(133)33(14-116)160-94)164-64-30(128)11-100(154,99(152)153)181-65(64)31(129)12-114/h18-23,30-81,86-98,114-119,128-147,154H,11-17,101H2,1-10H3,(H2,102,148)(H2,103,149)(H2,104,150)(H2,105,151)(H,106,120)(H,107,121)(H,108,122)(H,109,123)(H,110,124)(H,111,125)(H,112,126)(H,113,127)(H,152,153)/t20-,21-,22-,23-,30-,31-,32-,33-,34-,35-,36-,37-,38-,39-,40-,41-,42-,43-,44-,45-,46-,47-,48+,49-,50-,51-,52+,53+,54-,55-,56-,57-,58+,59+,60-,61-,62-,63+,64-,65-,66-,67-,68-,69-,70-,71-,72-,73-,74-,75+,76+,77+,78+,79+,80+,81+,86-,87+,88+,89+,90+,91+,92+,93+,94+,95-,96+,97-,98+,100-/m1/s1;   InChIKey=GEGFIDQJDXEUEK-MDDMICQCSA-N;   SMILES=[H]C(=O)N[C@@H]1[C@@H](C)O[C@@H](O[C@@H]2[C@H](O)[C@@H](NC(C)=O)[C@@H](O[C@@H]3[C@H](O)[C@@H](NC(C)=O)[C@@H](O[C@H]4[C@H](O)[C@@H](C)O[C@@H](O[C@@H]5[C@@H](O)[C@H](NC([H])=O)[C@@H](C)O[C@H]5O[C@@H]5[C@H](O)[C@@H](NC(C)=O)[C@@H](O[C@@H]6[C@H](O)[C@@H](NC(C)=O)[C@@H](O[C@H]7[C@H](O)[C@@H](C)O[C@@H](O[C@@H]8[C@@H](CO)O[C@@H](O[C@H]9[C@H](O)[C@H](O[C@@H]%10O[C@H](CO)[C@@H](O)[C@H](O)[C@H]%10O)[C@H](O[C@@H]9CO)O[C@@H]9[C@H](O)C[C@@](O)(O[C@]9([H])[C@H](O)CO)C(O)=O)[C@@H](O[C@H]9O[C@H](CO)[C@H](O)[C@H](O)[C@H]9N)[C@H]8O[C@H]8O[C@H](CO)[C@@H](O)[C@H](O)[C@H]8O)[C@@H]7NC(C)=O)O[C@@H]6C(N)=O)O[C@@H]5C(N)=O)[C@@H]4NC(C)=O)O[C@@H]3C(N)=O)O[C@@H]2C(N)=O)[C@H](O)[C@H]1O;   beta-D-QuipN4Fm-(1->4)-alpha-D-GalpNAcAN-(1->4)-alpha-D-GalpNAcAN-(1->3)-beta-D-QuipNAc-(1->2)-beta-D-QuipN4Fm-(1->4)-alpha-D-GalpNAcAN-(1->4)-alpha-D-GalpNAcAN-(1->3)-beta-D-QuipNAc-(1->4)-[alpha-D-GalpN-(1->2)]-[alpha-D-Glcp-(1->3)]-beta-D-Manp-(1->4)-[beta-D-Glcp-(1->2)]-alpha-D-Manp-(1->5)-alpha-Kdo
 xref: PMID:22486311



show annotations for term's descendants           Sort by:
 

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 0
    chemical entity 0
      atom 0
        nonmetal atom 0
          oxygen atom 0
            oxygen molecular entity 0
              organooxygen compound 0
                carbohydrates and carbohydrate derivatives 0
                  glycan 0
                    oligosaccharide derivative 0
                      amino oligosaccharide 0
                        beta-D-QuiN4Fm-(1->4)-alpha-D-GalNAcAN-(1->4)-alpha-D-GalNAcAN-(1->3)-beta-D-QuiNAc-(1->2)-beta-D-QuiN4Fm-(1->4)-alpha-D-GalNAcAN-(1->4)-alpha-D-GalNAcAN-(1->3)-beta-D-QuiNAc-(1->4)-[alpha-D-GalN-(1->2)]-[alpha-D-Glc-(1->3)]-beta-D-Man-(1->4)-[beta-D-Glc-(1->2)]-alpha-D-Man-(1->5)-alpha-Kdo 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 0
    subatomic particle 0
      composite particle 0
        hadron 0
          baryon 0
            nucleon 0
              atomic nucleus 0
                atom 0
                  main group element atom 0
                    p-block element atom 0
                      carbon group element atom 0
                        carbon atom 0
                          organic molecular entity 0
                            heteroorganic entity 0
                              organochalcogen compound 0
                                organooxygen compound 0
                                  carbohydrates and carbohydrate derivatives 0
                                    carbohydrate 0
                                      oligosaccharide 0
                                        oligosaccharide derivative 0
                                          amino oligosaccharide 0
                                            galactosamine oligosaccharide 0
                                              beta-D-QuiN4Fm-(1->4)-alpha-D-GalNAcAN-(1->4)-alpha-D-GalNAcAN-(1->3)-beta-D-QuiNAc-(1->2)-beta-D-QuiN4Fm-(1->4)-alpha-D-GalNAcAN-(1->4)-alpha-D-GalNAcAN-(1->3)-beta-D-QuiNAc-(1->4)-[alpha-D-GalN-(1->2)]-[alpha-D-Glc-(1->3)]-beta-D-Man-(1->4)-[beta-D-Glc-(1->2)]-alpha-D-Man-(1->5)-alpha-Kdo 0
paths to the root