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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:panaxydol
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Accession:CHEBI:66723 term browser browse the term
Definition:An acetylenic compound that has formula C17H24O2.
Synonyms:exact_synonym: (3R)-8-[(2R,3S)-3-heptyloxiran-2-yl]oct-1-ene-4,6-diyn-3-ol
 related_synonym: Formula=C17H24O2;   InChI=1S/C17H24O2/c1-3-5-6-7-10-13-16-17(19-16)14-11-8-9-12-15(18)4-2/h4,15-18H,2-3,5-7,10,13-14H2,1H3/t15-,16+,17-/m1/s1;   InChIKey=GVLDSGIQZAFIAN-IXDOHACOSA-N;   SMILES=CCCCCCC[C@@H]1O[C@@H]1CC#CC#C[C@H](O)C=C
 xref: CAS:72800-72-7;   KNApSAcK:C00030922
 xref_mesh: MESH:C055778
 xref: PMID:2092947;   Reaxys:7926422


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panaxydol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afp alpha-fetoprotein decreases secretion ISO panaxydol results in decreased secretion of AFP protein CTD PMID:19450571 NCBI chr14:19,141,755...19,159,919
Ensembl chr14:19,141,755...19,159,923
JBrowse link
G Alb albumin increases secretion ISO panaxydol results in increased secretion of ALB protein CTD PMID:19450571 NCBI chr14:19,176,275...19,191,793
Ensembl chr14:19,176,277...19,191,863
JBrowse link
G Bdnf brain-derived neurotrophic factor multiple interactions EXP panaxydol inhibits the reaction [Oxygen deficiency results in decreased expression of BDNF mRNA]; panaxydol inhibits the reaction [Oxygen deficiency results in decreased secretion of BDNF protein]; panaxydol results in increased expression of and results in increased secretion of BDNF protein CTD PMID:18541227 PMID:18805406 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Casp3 caspase 3 multiple interactions EXP panaxydol inhibits the reaction [Oxygen deficiency results in increased activity of CASP3 protein] CTD PMID:18541227 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A increases expression ISO panaxydol results in increased expression of CDKN1A mRNA; panaxydol results in increased expression of CDKN1A protein CTD PMID:19450571 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein decreases expression ISO panaxydol results in decreased expression of ID1 mRNA CTD PMID:19450571 NCBI chr 3:148,214,623...148,216,715
Ensembl chr 3:148,215,540...148,216,718
JBrowse link
G Id2 inhibitor of DNA binding 2 decreases expression ISO panaxydol results in decreased expression of ID2 mRNA CTD PMID:19450571 NCBI chr 6:44,360,077...44,361,908
Ensembl chr 6:44,348,501...44,363,915
JBrowse link
G Ngf nerve growth factor multiple interactions
increases secretion
EXP panaxydol promotes the reaction [Oxygen deficiency results in increased expression of NGF mRNA]; panaxydol results in increased expression of and results in increased secretion of NGF protein
panaxydol results in increased secretion of NGF protein
CTD PMID:18541227 PMID:18805406 NCBI chr 2:204,886,158...204,939,523
Ensembl chr 2:204,886,202...204,940,453
JBrowse link
G Rb1 RB transcriptional corepressor 1 increases expression ISO panaxydol results in increased expression of RB1 protein; panaxydol results in increased expression of RB1 protein modified form CTD PMID:19450571 NCBI chr15:55,081,582...55,209,060
Ensembl chr15:55,083,140...55,209,342
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19771
    chemical entity 19771
      molecular entity 19770
        main group molecular entity 19658
          gas molecular entity 17757
            oxirane 9561
              epoxide 9560
                panaxydol 9
Path 2
Term Annotations click to browse term
  CHEBI ontology 19771
    subatomic particle 19770
      composite particle 19770
        hadron 19770
          baryon 19770
            nucleon 19770
              atomic nucleus 19770
                atom 19770
                  main group element atom 19658
                    p-block element atom 19658
                      carbon group element atom 19574
                        carbon atom 19564
                          organic molecular entity 19564
                            organic molecule 19497
                              organic cyclic compound 19321
                                organic heterocyclic compound 18512
                                  organic heteromonocyclic compound 16988
                                    saturated organic heteromonocyclic parent 9581
                                      oxirane 9561
                                        epoxide 9560
                                          panaxydol 9
paths to the root