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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:(-)-secoisolariciresinol
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Accession:CHEBI:65004 term browser browse the term
Definition:An enantiomer of secoisolariciresinol having (-)-(2R,3R)-configuration.
Synonyms:exact_synonym: (2R,3R)-2,3-bis(4-hydroxy-3-methoxybenzyl)butane-1,4-diol
 related_synonym: Formula=C20H26O6;   InChI=1S/C20H26O6/c1-25-19-9-13(3-5-17(19)23)7-15(11-21)16(12-22)8-14-4-6-18(24)20(10-14)26-2/h3-6,9-10,15-16,21-24H,7-8,11-12H2,1-2H3/t15-,16-/m0/s1;   InChIKey=PUETUDUXMCLALY-HOTGVXAUSA-N;   SMILES=COc1cc(C[C@@H](CO)[C@H](CO)Cc2ccc(O)c(OC)c2)ccc1O
 xref: CAS:29388-59-8;   HMDB:HMDB0013692;   KEGG:C18167;   LINCS:LSM-5964
 xref_mesh: MESH:C060283
 xref: MetaCyc:CPD-8909;   PMID:15653677;   PMID:21837520;   PMID:21897049;   PMID:21958542;   PMID:22030618;   PMID:22037685;   PMID:22476613;   Reaxys:1893026
 cyclic_relationship: is_enantiomer_of CHEBI:67247


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(-)-secoisolariciresinol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 increases activity ISO secoisolariciresinol results in increased activity of NR1I2 protein CTD PMID:15885729 NCBI chr11:65,022,100...65,058,546
Ensembl chr11:65,022,100...65,058,545
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Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19810
    role 19758
      application 19420
        pro-agent 8857
          prodrug 8623
            butane-1,4-diol 62
              secoisolariciresinol 1
                (-)-secoisolariciresinol 1
                  7-hydroxysecoisolariciresinol 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19810
    subatomic particle 19808
      composite particle 19808
        hadron 19808
          baryon 19808
            nucleon 19808
              atomic nucleus 19808
                atom 19808
                  main group element atom 19696
                    p-block element atom 19696
                      chalcogen 19391
                        oxygen atom 19353
                          oxygen molecular entity 19353
                            hydroxides 19103
                              organic hydroxy compound 18658
                                polyol 7814
                                  diol 2729
                                    butanediols 143
                                      butanediol 66
                                        butane-1,4-diol 62
                                          secoisolariciresinol 1
                                            (-)-secoisolariciresinol 1
                                              7-hydroxysecoisolariciresinol 0
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