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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:(-)-secoisolariciresinol
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Accession:CHEBI:65004 term browser browse the term
Definition:An enantiomer of secoisolariciresinol having (-)-(2R,3R)-configuration.
Synonyms:exact_synonym: (2R,3R)-2,3-bis(4-hydroxy-3-methoxybenzyl)butane-1,4-diol
 related_synonym: Formula=C20H26O6;   InChI=1S/C20H26O6/c1-25-19-9-13(3-5-17(19)23)7-15(11-21)16(12-22)8-14-4-6-18(24)20(10-14)26-2/h3-6,9-10,15-16,21-24H,7-8,11-12H2,1-2H3/t15-,16-/m0/s1;   InChIKey=PUETUDUXMCLALY-HOTGVXAUSA-N;   SMILES=COc1cc(C[C@@H](CO)[C@H](CO)Cc2ccc(O)c(OC)c2)ccc1O
 xref: CAS:29388-59-8;   HMDB:HMDB0013692;   KEGG:C18167;   LINCS:LSM-5964
 xref_mesh: MESH:C060283
 xref: MetaCyc:CPD-8909;   PMID:15653677;   PMID:21837520;   PMID:21897049;   PMID:21958542;   PMID:22030618;   PMID:22037685;   PMID:22476613;   Reaxys:1893026
 cyclic_relationship: is_enantiomer_of CHEBI:67247



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(-)-secoisolariciresinol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 increases activity ISO secoisolariciresinol results in increased activity of NR1I2 protein CTD PMID:15885729 NCBI chr11:62,460,213...62,496,665
Ensembl chr11:62,460,213...62,496,658
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Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20089
    role 20042
      application 19781
        pro-agent 10161
          prodrug 9964
            butane-1,4-diol 64
              secoisolariciresinol 1
                (-)-secoisolariciresinol 1
                  7-hydroxysecoisolariciresinol 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 20089
    subatomic particle 20058
      composite particle 20058
        hadron 20088
          baryon 20088
            nucleon 20088
              atomic nucleus 20088
                atom 20058
                  main group element atom 19960
                    p-block element atom 19990
                      chalcogen 19732
                        oxygen atom 19674
                          oxygen molecular entity 19674
                            hydroxides 19454
                              organic hydroxy compound 19017
                                polyol 11024
                                  diol 3353
                                    butanediols 155
                                      butanediol 68
                                        butane-1,4-diol 64
                                          secoisolariciresinol 1
                                            (-)-secoisolariciresinol 1
                                              7-hydroxysecoisolariciresinol 0
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