Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:fumigaclavine C
go back to main search page
Accession:CHEBI:64673 term browser browse the term
Definition:An ergot alkaloid produced by the fungus Aspergillus fumigatus that is ergoline which is substituted by a 2-methylbut-3-en-2-yl group at position 2, methyl groups at the 6 and 8beta positions, and by an acetoxy group at the 9beta position.
Synonyms:exact_synonym: (8beta,9beta)-6,8-dimethyl-2-(2-methylbut-3-en-2-yl)ergolin-9-yl acetate
 related_synonym: Formula=C23H30N2O2;   InChI=1S/C23H30N2O2/c1-7-23(4,5)22-16-11-18-20(15-9-8-10-17(24-22)19(15)16)21(27-14(3)26)13(2)12-25(18)6/h7-10,13,18,20-21,24H,1,11-12H2,2-6H3/t13-,18+,20+,21-/m0/s1;   InChIKey=OSICWVVWEXKSBD-LFAYTRTRSA-N;   SMILES=[H][C@@]12Cc3c([nH]c4cccc(c34)[C@@]1([H])[C@@H](OC(C)=O)[C@@H](C)CN2C)C(C)(C)C=C
 xref: CAS:62867-47-4 "ChemIDplus"
 xref_mesh: MESH:C492995
 xref: MetaCyc:CPD-12338;   PMID:15231043 "Europe PMC";   PMID:16023606 "Europe PMC";   PMID:16397874 "Europe PMC";   PMID:16557450 "Europe PMC";   PMID:16902860 "Europe PMC";   PMID:18678866 "Europe PMC";   PMID:19256529 "Europe PMC";   PMID:21762706 "Europe PMC";   PMID:22344643 "Europe PMC";   PMID:350117 "Europe PMC";   Reaxys:19760287 "Reaxys"
 cyclic_relationship: is_conjugate_base_of CHEBI:67147


show annotations for term's descendants       view all columns           Sort by:
 
fumigaclavine C term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:6480464
G Il12a interleukin 12A JBrowse link 2 165,076,945 165,083,996 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:6480464
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:6480464
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19669
    role 19613
      biological role 19611
        biochemical role 19138
          metabolite 19106
            fumigaclavine C 6
              9-deacetoxyfumigaclavine C 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19669
    subatomic particle 19665
      composite particle 19665
        hadron 19665
          baryon 19665
            nucleon 19665
              atomic nucleus 19665
                atom 19665
                  main group element atom 19545
                    main group molecular entity 19545
                      s-block molecular entity 19329
                        hydrogen molecular entity 19319
                          hydrides 18242
                            inorganic hydride 17104
                              pnictogen hydride 17062
                                nitrogen hydride 16885
                                  azane 16564
                                    ammonia 16561
                                      organic amino compound 16560
                                        polyamine 8075
                                          diamine 8002
                                            ergoline 17
                                              fumigaclavine C 6
                                                9-deacetoxyfumigaclavine C 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.