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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:depudecin
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Accession:CHEBI:64143 term browser browse the term
Definition:A polyketide obtained from the fungus Alternaria brassicicola and having a highly unusual structure of an 11-carbon chain containing two epoxides and six stereogenic centres. It is an inhibitor of histone deacetylase (HDAC) both in vivo and in vitro and also exhibits anti-angiogenic activity.
Synonyms:exact_synonym: (1R)-1-{(2S,3S)-3-[(E)-2-{(2S,3S)-3-[(1R)-1-hydroxyethyl]oxiran-2-yl}ethenyl]oxiran-2-yl}prop-2-en-1-ol;   (1S,3E,6S)-1,2:5,6-dianhydro-3,4-dideoxy-1-[(1R)-1-hydroxyethyl]-6-[(1R)-1-hydroxyprop-2-en-1-yl]-D-threo-hex-3-enitol
 related_synonym: 4,5:8,9-dianhydro-1,2,6,7,11-pentadeoxy-D-threo-D-ido-undeca-1,6-dienitol;   Formula=C11H16O4;   InChI=1S/C11H16O4/c1-3-7(13)11-9(15-11)5-4-8-10(14-8)6(2)12/h3-13H,1H2,2H3/b5-4+/t6-,7-,8+,9+,10+,11+/m1/s1;   InChIKey=DLVJMFOLJOOWFS-INMLLLKOSA-N;   SMILES=[H][C@]1(O[C@H]1\\C=C\\[C@@H]1O[C@@]1([H])[C@H](O)C=C)[C@@H](C)O
 xref: CAS:139508-73-9;   PMID:10737176;   PMID:11562279;   PMID:12623206;   PMID:1500354;   PMID:1731795;   PMID:19737099;   PMID:8845831;   PMID:9383455;   PMID:9520362;   PMID:9520369;   Reaxys:6803701



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Path 1
Term Annotations click to browse term
  CHEBI ontology 19659
    role 19634
      biological role 19633
        biochemical role 19388
          metabolite 19333
            eukaryotic metabolite 19135
              fungal metabolite 17532
                depudecin 0
                  depdecin 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19659
    subatomic particle 19658
      composite particle 19658
        hadron 19658
          baryon 19658
            nucleon 19658
              atomic nucleus 19700
                atom 19658
                  main group element atom 19607
                    p-block element atom 19607
                      carbon group element atom 19550
                        carbon atom 19547
                          organic molecular entity 19588
                            heteroorganic entity 19296
                              organochalcogen compound 19093
                                organooxygen compound 19036
                                  polyketide 10308
                                    depudecin 0
                                      depdecin 0
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