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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:tetronic acid derivative
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Accession:CHEBI:63455 term browser browse the term
Definition:An aldonic acid derivative that is formally obtained from a tetronic acid.
Synonyms:related_synonym: tetronic acid derivatives


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2,3-bisphospho-D-glyceric acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf6 ADP-ribosylation factor 6 multiple interactions ISO 2,3-Diphosphoglycerate inhibits the reaction [ARF6 protein affects the reaction [N-Formylmethionine Leucyl-Phenylalanine results in increased abundance of Superoxides]]; 2,3-Diphosphoglycerate inhibits the reaction [ARF6 protein mutant form promotes the reaction [N-Formylmethionine Leucyl-Phenylalanine results in increased abundance of Superoxides]] CTD PMID:10931844 NCBI chr12:69,372,150...69,375,980
Ensembl chr12:69,372,150...69,373,783
JBrowse link
G Bglap bone gamma carboxyglutamate protein decreases activity ISO 2,3-Diphosphoglycerate results in decreased activity of BGLAP protein CTD PMID:16857255 NCBI chr 3:88,383,495...88,384,466
Ensembl chr 3:88,383,501...88,384,464
JBrowse link
G Pld1 phospholipase D1 decreases activity ISO 2,3-Diphosphoglycerate results in decreased activity of PLD1 protein CTD PMID:16857255 NCBI chr 3:27,938,459...28,133,362
Ensembl chr 3:27,938,695...28,133,362
JBrowse link
G Sts steroid sulfatase multiple interactions ISO 2,3-Diphosphoglycerate inhibits the reaction [Tretinoin results in increased activity of STS protein] CTD PMID:16178010
2,3-bisphosphoglyceric acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf6 ADP-ribosylation factor 6 multiple interactions ISO 2,3-Diphosphoglycerate inhibits the reaction [ARF6 protein affects the reaction [N-Formylmethionine Leucyl-Phenylalanine results in increased abundance of Superoxides]]; 2,3-Diphosphoglycerate inhibits the reaction [ARF6 protein mutant form promotes the reaction [N-Formylmethionine Leucyl-Phenylalanine results in increased abundance of Superoxides]] CTD PMID:10931844 NCBI chr12:69,372,150...69,375,980
Ensembl chr12:69,372,150...69,373,783
JBrowse link
G Bglap bone gamma carboxyglutamate protein decreases activity ISO 2,3-Diphosphoglycerate results in decreased activity of BGLAP protein CTD PMID:16857255 NCBI chr 3:88,383,495...88,384,466
Ensembl chr 3:88,383,501...88,384,464
JBrowse link
G Pld1 phospholipase D1 decreases activity ISO 2,3-Diphosphoglycerate results in decreased activity of PLD1 protein CTD PMID:16857255 NCBI chr 3:27,938,459...28,133,362
Ensembl chr 3:27,938,695...28,133,362
JBrowse link
G Sts steroid sulfatase multiple interactions ISO 2,3-Diphosphoglycerate inhibits the reaction [Tretinoin results in increased activity of STS protein] CTD PMID:16178010
3-phosphoglyceric acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gapdh glyceraldehyde-3-phosphate dehydrogenase multiple interactions ISO [GAPDH protein co-treated with 3-phosphoglycerate co-treated with NAD] results in increased chemical synthesis of sodium arsenite; [GAPDH protein co-treated with 3-phosphoglycerate co-treated with NAD] results in increased reduction of sodium arsenate analog; heptelidic acid inhibits the reaction [[GAPDH protein co-treated with 3-phosphoglycerate co-treated with NAD] results in increased reduction of sodium arsenate analog] CTD PMID:15788719 NCBI chr 6:125,161,852...125,166,467
Ensembl chr 6:125,161,715...125,166,467
JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial multiple interactions
increases abundance
EXP Triazines inhibits the reaction [IDH2 protein mutant form results in increased abundance of 3-phosphoglycerate] CTD PMID:27469509 NCBI chr 7:80,094,845...80,118,608
Ensembl chr 7:80,094,846...80,115,392
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 21720
    role 21698
      chemical role 20822
        donor 19648
          Bronsted acid 19476
            oxoacid 19436
              carbon oxoacid 19168
                carboxylic acid 19157
                  monocarboxylic acid 18458
                    aldonic acid 56
                      tetronic acid 7
                        tetronic acid derivative 6
                          2,3-bisphosphoglyceric acid + 4
                          2-phosphoglyceric acid + 0
                          3-ADP-2-phosphoglyceric acid 0
                          3-ADP-glyceric acid + 0
                          3-phosphoglyceric acid + 2
                          carlosic acid + 0
                          carlosic acid methyl ester 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 21720
    subatomic particle 21705
      composite particle 21705
        hadron 21705
          baryon 21705
            nucleon 21705
              atomic nucleus 21705
                atom 21705
                  main group element atom 21622
                    p-block element atom 21622
                      carbon group element atom 21427
                        carbon atom 21326
                          organic molecular entity 21326
                            organic group 19886
                              organic divalent group 19876
                                organodiyl group 19876
                                  carbonyl group 19859
                                    carbonyl compound 19859
                                      carboxylic acid 19157
                                        monocarboxylic acid 18458
                                          aldonic acid 56
                                            tetronic acid 7
                                              tetronic acid derivative 6
                                                2,3-bisphosphoglyceric acid + 4
                                                2-phosphoglyceric acid + 0
                                                3-ADP-2-phosphoglyceric acid 0
                                                3-ADP-glyceric acid + 0
                                                3-phosphoglyceric acid + 2
                                                carlosic acid + 0
                                                carlosic acid methyl ester 0
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