Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:sodium nitrate
go back to main search page
Accession:CHEBI:63005 term browser browse the term
Definition:The inorganic nitrate salt of sodium.
Synonyms:exact_synonym: sodium trioxidonitrate(1-)
 related_synonym: Chile saltpeter;   Cubic niter;   Formula=NNaO3;   InChI=1S/NO3.Na/c2-1(3)4;/q-1;+1;   InChIKey=VWDWKYIASSYTQR-UHFFFAOYSA-N;   Niter;   Nitrate de sodium;   Nitrate of soda;   Nitric acid monosodium salt;   Nitric acid sodium salt (1:1);   Nitric acid, sodium salt;   SMILES=[Na+].[O-][N+]([O-])=O;   Sodium saltpeter;   Sodium(I) nitrate (1:1)
 xref: CAS:7631-99-4
 xref_mesh: MESH:C031618
 xref: Reaxys:11343077;   Wikipedia:Sodium_nitrate

show annotations for term's descendants           Sort by:
 
sodium nitrate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of ACADL protein] CTD PMID:21251210 NCBI chr 9:73,833,368...73,871,857
Ensembl chr 9:73,833,388...73,871,888 		JBrowse link
G Actc1 actin, alpha, cardiac muscle 1 multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of ACTC1 protein] CTD PMID:21251210 NCBI chr 3:105,507,403...105,512,939
Ensembl chr 3:105,507,403...105,512,939 		JBrowse link
G Afp alpha-fetoprotein multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in decreased expression of AFP protein] CTD PMID:21251210 NCBI chr14:19,141,755...19,159,919
Ensembl chr14:19,141,755...19,159,923 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of ATP5B protein] CTD PMID:21251210 NCBI chr 7:2,504,708...2,511,748
Ensembl chr 7:2,504,695...2,511,749 		JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of ATP5H protein] CTD PMID:21251210 NCBI chr10:103,967,340...103,972,552
Ensembl chr10:103,967,312...103,972,668 		JBrowse link
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 increases expression ISO sodium nitrate results in increased expression of CACNA2D1 protein CTD PMID:22687611 NCBI chr 4:15,706,974...16,130,848
Ensembl chr 4:15,710,417...16,130,848 		JBrowse link
G Casq1 calsequestrin 1 increases expression ISO sodium nitrate results in increased expression of CASQ1 protein CTD PMID:22687611 NCBI chr13:90,592,676...90,602,365
Ensembl chr13:90,592,681...90,602,365 		JBrowse link
G Cat catalase decreases activity EXP sodium nitrate results in decreased activity of CAT protein CTD PMID:24740966 NCBI chr 3:93,379,872...93,412,058
Ensembl chr 3:93,379,874...93,412,058 		JBrowse link
G Cox4i1 cytochrome c oxidase subunit 4i1 multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of COX4I1 protein] CTD PMID:21251210 NCBI chr19:54,245,958...54,252,198
Ensembl chr19:54,245,950...54,252,225 		JBrowse link
G Cryab crystallin, alpha B multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of CRYAB protein] CTD PMID:21251210 NCBI chr 8:55,178,543...55,182,546
Ensembl chr 8:55,178,289...55,182,545 		JBrowse link
G Fabp3 fatty acid binding protein 3 multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of FABP3 protein] CTD PMID:21251210 NCBI chr 5:148,528,854...148,535,597
Ensembl chr 5:148,528,725...148,535,565 		JBrowse link
G Fth1 ferritin heavy chain 1 multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in decreased expression of FTH1 protein] CTD PMID:21251210 NCBI chr 1:226,030,940...226,033,228
Ensembl chr 1:226,030,938...226,033,228 		JBrowse link
G G6pd glucose-6-phosphate dehydrogenase decreases activity EXP sodium nitrate results in decreased activity of G6PD protein CTD PMID:19922758 NCBI chr  X:156,274,800...156,293,935
Ensembl chr  X:156,274,800...156,293,926 		JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of GOT1 protein] CTD PMID:21251210 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762 		JBrowse link
G Gsr glutathione-disulfide reductase multiple interactions ISO [Quercetin co-treated with sodium nitrate] results in increased activity of GSR protein CTD PMID:24860958 NCBI chr16:62,197,617...62,239,987
Ensembl chr16:62,197,617...62,241,361 		JBrowse link
G Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of IDH3A protein] CTD PMID:21251210 NCBI chr 8:59,164,601...59,183,899
Ensembl chr 8:59,164,572...59,183,908 		JBrowse link
G Ldhc lactate dehydrogenase C decreases activity EXP sodium nitrate results in decreased activity of LDHC protein CTD PMID:19922758 NCBI chr 1:102,914,875...102,931,843
Ensembl chr 1:102,915,191...102,931,839 		JBrowse link
G Mb myoglobin multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of MB protein] CTD PMID:21251210 NCBI chr 7:118,101,633...118,108,864
Ensembl chr 7:118,101,634...118,108,864 		JBrowse link
G Mpo myeloperoxidase multiple interactions EXP sodium nitrate inhibits the reaction [Diclofenac results in increased activity of MPO protein] CTD PMID:17275683 NCBI chr10:75,087,892...75,098,260
Ensembl chr10:75,087,892...75,098,260 		JBrowse link
G Muc6 mucin 6, oligomeric mucus/gel-forming increases expression EXP sodium nitrate results in increased expression of MUC6 mRNA CTD PMID:17275683 NCBI chr 1:214,608,453...214,630,524
Ensembl chr 1:214,608,704...214,629,938 		JBrowse link
G Myh6 myosin heavy chain 6 multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in decreased expression of MYH6 protein] CTD PMID:21251210 NCBI chr15:33,605,653...33,629,730
Ensembl chr15:33,605,654...33,629,699 		JBrowse link
G Myl2 myosin light chain 2 multiple interactions ISO [sodium nitrate co-treated with Doxorubicin] results in decreased expression of MYL2 protein; sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of MYL2 protein] CTD PMID:21251210 NCBI chr12:39,951,863...39,959,065
Ensembl chr12:39,951,987...39,958,239 		JBrowse link
G Myl3 myosin light chain 3 multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of MYL3 protein] CTD PMID:21251210 NCBI chr 8:119,030,852...119,036,996
Ensembl chr 8:119,030,875...119,036,996 		JBrowse link
G Myoz2 myozenin 2 multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of MYOZ2 protein] CTD PMID:21251210 NCBI chr 2:227,180,887...227,207,629
Ensembl chr 2:227,180,886...227,207,635 		JBrowse link
G Nos2 nitric oxide synthase 2 multiple interactions EXP sodium nitrate inhibits the reaction [Diclofenac results in increased expression of NOS2 mRNA] CTD PMID:17275683 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190 		JBrowse link
G Nos3 nitric oxide synthase 3 multiple interactions ISO sodium nitrate inhibits the reaction [NOS3 gene mutant form results in increased abundance of Triglycerides] CTD PMID:20876122 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410 		JBrowse link
G Pkm pyruvate kinase M1/2 multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of PKM protein] CTD PMID:21251210 NCBI chr 8:64,480,963...64,502,957
Ensembl chr 8:64,481,172...64,502,722 		JBrowse link
G Prdx3 peroxiredoxin 3 multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of PRDX3 protein] CTD PMID:21251210 NCBI chr 1:282,238,774...282,251,193
Ensembl chr 1:282,238,773...282,251,257 		JBrowse link
G Prdx5 peroxiredoxin 5 increases expression
multiple interactions		 ISO sodium nitrate results in increased expression of PRDX5 protein
sodium nitrate inhibits the reaction [Doxorubicin results in decreased expression of PRDX5 protein]		 CTD PMID:21251210 PMID:22484629 NCBI chr 1:222,164,462...222,167,447
Ensembl chr 1:222,164,462...222,167,447 		JBrowse link
G Pygb glycogen phosphorylase B multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in decreased expression of PYGB protein] CTD PMID:21251210 NCBI chr 3:146,581,063...146,629,504
Ensembl chr 3:146,582,752...146,634,535 		JBrowse link
G Pygm glycogen phosphorylase, muscle associated multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of PYGM protein] CTD PMID:21251210 NCBI chr 1:221,756,325...221,771,142
Ensembl chr 1:221,756,286...221,771,143 		JBrowse link
G Sod2 superoxide dismutase 2 multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of SOD2 protein] CTD PMID:21251210 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587 		JBrowse link
G Srl sarcalumenin multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of SRL protein] CTD PMID:21251210 NCBI chr10:11,240,135...11,284,325
Ensembl chr10:11,240,138...11,284,332 		JBrowse link
G Suclg2 succinate-CoA ligase GDP-forming subunit beta multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in decreased expression of SUCLG2 protein] CTD PMID:21251210 NCBI chr 4:127,552,100...127,824,970
Ensembl chr 4:127,552,101...127,824,970 		JBrowse link
G Uqcrc1 ubiquinol-cytochrome c reductase core protein 1 multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in increased expression of UQCRC1 protein] CTD PMID:21251210 NCBI chr 8:117,679,328...117,691,073
Ensembl chr 8:117,679,278...117,691,071 		JBrowse link
G Xdh xanthine dehydrogenase increases metabolic processing ISO XDH protein results in increased metabolism of sodium nitrate CTD PMID:20142047 NCBI chr 6:25,149,570...25,211,273
Ensembl chr 6:25,149,235...25,211,494 		JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta multiple interactions ISO sodium nitrate inhibits the reaction [Doxorubicin results in decreased expression of YWHAZ protein] CTD PMID:21251210 NCBI chr 7:75,573,553...75,598,295
Ensembl chr 7:75,574,967...75,597,276 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19883
    role 19833
      application 19505
        agrochemical 14686
          fertilizer 11888
            sodium nitrate 37
Path 2
Term Annotations click to browse term
  CHEBI ontology 19883
    subatomic particle 19881
      composite particle 19881
        hadron 19881
          baryon 19881
            nucleon 19881
              atomic nucleus 19881
                atom 19881
                  main group element atom 19771
                    p-block element atom 19771
                      chalcogen 19464
                        oxygen atom 19425
                          oxygen molecular entity 19425
                            oxide 11655
                              oxoanion 8764
                                pnictogen oxoanion 3553
                                  nitrogen oxoanion 341
                                    nitrate 328
                                      nitrate salt 328
                                        inorganic nitrate salt 328
                                          sodium nitrate 37
paths to the root