Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:beta-D-Galp-(1->3)-[alpha-L-Fucp-(1->4)]-beta-D-GlcpNAc-(1->3)-beta-D-Galp-(1->4)-[alpha-L-Fucp-(1->3)]-D-Glcp
go back to main search page
Accession:CHEBI:62520 term browser browse the term
Definition:A linear amino hexasaccharide consisting of two galactosyl, one glucosamine, two fucose and one glucose residue (at the reducing end) linked as shown.
Synonyms:exact_synonym: alpha-L-fucopyranosyl-(1->3)-[6-deoxy-alpha-L-fucopyranosyl-(1->4)-[beta-D-galactopyranosyl-(1->3)]-2-acetamido-2-deoxy-beta-D-glucopyranosyl-(1->3)-beta-D-galactopyranosyl-(1->4)]-D-glucopyranose
 related_synonym: (Gal)2 (Glc)1 (GlcNAc)1 (LFuc)2;   6-deoxy-alpha-L-galactopyranosyl-(1->3)-[6-deoxy-alpha-L-galactopyranosyl-(1->4)-[beta-D-galactopyranosyl-(1->3)]-2-acetamido-2-deoxy-beta-D-glucopyranosyl-(1->3)-beta-D-galactopyranosyl-(1->4)]-D-glucopyranose;   Formula=C38H65NO29;   InChI=1S/C38H65NO29/c1-8-16(45)20(49)23(52)35(58-8)64-28-14(7-43)63-34(15(39-10(3)44)30(28)66-37-25(54)22(51)18(47)11(4-40)61-37)67-31-19(48)12(5-41)62-38(27(31)56)65-29-13(6-42)60-33(57)26(55)32(29)68-36-24(53)21(50)17(46)9(2)59-36/h8-9,11-38,40-43,45-57H,4-7H2,1-3H3,(H,39,44)/t8-,9-,11+,12+,13+,14+,15+,16+,17+,18-,19-,20+,21+,22-,23-,24-,25+,26+,27+,28+,29+,30+,31-,32+,33?,34-,35-,36-,37-,38-/m0/s1;   InChIKey=DMYPRRDPOMGEAK-XWDFSUOISA-N;   LDFH-II;   LND-II;   LNDFH II;   Lacto-N-difucohexaose II;   SMILES=C[C@@H]1O[C@@H](O[C@@H]2[C@@H](O)C(O)O[C@H](CO)[C@H]2O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@@H](C)[C@@H](O)[C@@H](O)[C@@H]4O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O)[C@H]4O)[C@H]3NC(C)=O)[C@H]2O)[C@@H](O)[C@H](O)[C@@H]1O;   WURCS=2.0/4,6,5/[a2122h-1x_1-5][a1221m-1a_1-5][a2112h-1b_1-5][a2122h-1b_1-5_2*NCC/3=O]/1-2-3-4-3-2/a3-b1_a4-c1_c3-d1_d3-e1_d4-f1;   alpha-L-Fuc-(1->3)-[6-deoxy-alpha-L-Fuc-(1->4)-[beta-D-Gal-(1->3)]-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)]-D-Glc;   alpha-L-Fucp-(1->3)-[6-deoxy-alpha-L-Fucp-(1->4)-[beta-D-Galp-(1->3)]-beta-D-GlcpNAc-(1->3)-beta-D-Galp-(1->4)]-D-Glcp;   alpha-L-fucosyl-(1->3)-[6-deoxy-alpha-L-fucosyl-(1->4)-[beta-D-galactosyl-(1->3)]-N-acetyl-beta-D-glucosaminyl-(1->3)-beta-D-galactosyl-(1->4)]-D-glucose;   beta-D-Gal-(1->3)-[alpha-L-Fuc-(1->4)]-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-[alpha-L-Fuc-(1->3)]-D-Glc;   beta-D-galactosyl-(1->3)-[alpha-L-fucosyl-(1->4)]-N-acetyl-beta-D-glucosaminyl-(1->3)-beta-D-galactosyl-(1->4)-[alpha-L-fucosyl-(1->3)]-D-glucose
 xref: GlyGen:G70115XG;   GlyTouCan:G70115XG;   KEGG:G00477;   PMID:11425797;   PMID:12568665;   PMID:15158661;   PMID:19171353;   PMID:2413844;   PMID:2908539;   PMID:3274083;   PMID:838694;   PMID:9271064;   Patent:KR20090057172;   Patent:MX2008015049;   Patent:US2010124551;   Patent:US7674605;   Reaxys:1340391



show annotations for term's descendants           Sort by:
 

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 21802
    chemical entity 21800
      atom 21788
        nonmetal atom 21681
          oxygen atom 20847
            oxygen molecular entity 20847
              organooxygen compound 20348
                carbohydrates and carbohydrate derivatives 12925
                  glycan 3549
                    oligosaccharide derivative 140
                      amino oligosaccharide 2
                        glucosamine oligosaccharide 0
                          beta-D-Galp-(1->3)-[alpha-L-Fucp-(1->4)]-beta-D-GlcpNAc-(1->3)-beta-D-Galp-(1->4)-[alpha-L-Fucp-(1->3)]-D-Glcp 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 21802
    subatomic particle 21788
      composite particle 21788
        hadron 21788
          baryon 21788
            nucleon 21788
              atomic nucleus 21788
                atom 21788
                  main group element atom 21705
                    p-block element atom 21705
                      carbon group element atom 21518
                        carbon atom 21417
                          organic molecular entity 21417
                            heteroorganic entity 21095
                              organochalcogen compound 20415
                                organooxygen compound 20348
                                  carbohydrates and carbohydrate derivatives 12925
                                    carbohydrate 12925
                                      oligosaccharide 575
                                        oligosaccharide derivative 140
                                          amino oligosaccharide 2
                                            glucosamine oligosaccharide 0
                                              beta-D-Galp-(1->3)-[alpha-L-Fucp-(1->4)]-beta-D-GlcpNAc-(1->3)-beta-D-Galp-(1->4)-[alpha-L-Fucp-(1->3)]-D-Glcp 0
paths to the root