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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:5-deoxy-4-epi-2,3-dehydro-Kdo-(4->8)-alpha-Kdo
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Accession:CHEBI:61570 term browser browse the term
Definition:A carbohydrate acid comprising 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid (Kdo) having a 5-deoxy-4-epi-2,3-dehydro-Kdo moiety attached via an unusual (4->8) non-glycosidic linkage.
Synonyms:exact_synonym: (6R)-6-[(1R)-2-({(2S,4R)-6-carboxy-2-[(1R)-1,2-dihydroxyethyl]-3,4-dihydro-2H-pyran-4-yl}oxy)-1-hydroxyethyl]-3-deoxy-beta-L-erythro-hex-2-ulopyranosonic acid
 related_synonym: Formula=C16H24O13;   InChI=1S/C16H24O13/c17-4-8(19)10-1-6(2-11(28-10)14(22)23)27-5-9(20)13-12(21)7(18)3-16(26,29-13)15(24)25/h2,6-10,12-13,17-21,26H,1,3-5H2,(H,22,23)(H,24,25)/t6-,7-,8-,9-,10+,12-,13-,16-/m1/s1;   InChIKey=UNHDIKYSAGHBNY-KWOHMGQJSA-N;   SMILES=[H][C@]1(C[C@@H](OC[C@@H](O)[C@@]2([H])O[C@](O)(C[C@@H](O)[C@H]2O)C(O)=O)C=C(O1)C(O)=O)[C@H](O)CO
 xref: PMID:18272175


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Path 1
Term Annotations click to browse term
  CHEBI ontology 26034
    role 25961
      chemical role 24242
        donor 23222
          Bronsted acid 23023
            oxoacid 22975
              carbon oxoacid 22749
                carboxylic acid 22729
                  carbohydrate acid 949
                    5-deoxy-4-epi-2,3-dehydro-Kdo-(4->8)-alpha-Kdo 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 26034
    subatomic particle 26009
      composite particle 26009
        hadron 26020
          baryon 26009
            nucleon 26009
              atomic nucleus 26009
                atom 26009
                  main group element atom 25834
                    p-block element atom 25834
                      carbon group element atom 25434
                        carbon atom 25403
                          organic molecular entity 25392
                            heteroorganic entity 24766
                              organochalcogen compound 24378
                                organooxygen compound 24054
                                  carbohydrates and carbohydrate derivatives 16772
                                    carbohydrate 16785
                                      carbohydrate acid 949
                                        ketoaldonic acid 797
                                          3-deoxy-D-manno-octulosonic acid 0
                                            3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid 0
                                              5-deoxy-4-epi-2,3-dehydro-Kdo-(4->8)-alpha-Kdo 0
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