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ONTOLOGY REPORT - ANNOTATIONS
Term:lysophosphatidylcholine
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Accession:CHEBI:60479 term browser browse the term
Definition:An acylglycerophosphocholine resulting from partial hydrolysis of a phosphatidylcholine, which removes one of the fatty acyl groups. The structure is depicted in the image where R1 = acyl, R2 = H or where R1 = H, R2 = acyl.
Synonyms:related_synonym: Formula=C9H19NO7PR;   SMILES=[C@](CO*)(O*)([H])COP(OCC[N+](C)(C)C)(=O)[O-];   lysophosphatidylcholines;   monoacylglycero-3-phosphocholine
 alt_id: MESH:D008244
 xref_mesh: MESH:D008244

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lysophosphatidylcholine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arntl aryl hydrocarbon receptor nuclear translocator-like JBrowse link 1 178,039,002 178,137,469 RGD:6480464
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:6480464
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 JBrowse link 7 94,479,931 94,563,086 RGD:6480464
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 JBrowse link 10 108,095,131 108,099,483 RGD:6480464
G Fscn1 fascin actin-bundling protein 1 JBrowse link 12 13,655,459 13,668,595 RGD:6480464
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:6480464
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:6480464
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:6480464
G Lama3 laminin subunit alpha 3 JBrowse link 18 3,704,866 3,941,215 RGD:6480464
G Lamb3 laminin subunit beta 3 JBrowse link 13 112,031,614 112,073,187 RGD:6480464
G Lamc2 laminin subunit gamma 2 JBrowse link 13 70,566,643 70,632,126 RGD:6480464
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:6480464
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:6480464
G Mfsd2a major facilitator superfamily domain containing 2A JBrowse link 5 140,642,865 140,657,759 RGD:6480464
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:6480464
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:6480464
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 JBrowse link 13 53,750,470 53,870,288 RGD:6480464
G Pah phenylalanine hydroxylase JBrowse link 7 28,066,639 28,129,772 RGD:6480464
G Prkce protein kinase C, epsilon JBrowse link 6 9,483,400 9,973,396 RGD:6480464
G Ptgs1 prostaglandin-endoperoxide synthase 1 JBrowse link 3 15,560,685 15,582,339 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:6480464
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:6480464
G Trpc5 transient receptor potential cation channel, subfamily C, member 5 JBrowse link X 115,624,670 115,908,248 RGD:6480464
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:6480464
1-O-oleoyl-sn-glycero-3-phosphocholine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 JBrowse link 13 53,750,470 53,870,288 RGD:6480464
G Smad3 SMAD family member 3 JBrowse link 8 68,569,530 68,678,349 RGD:6480464
1-stearoyl-sn-glycero-3-phosphocholine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:6480464
G Lipg lipase G, endothelial type JBrowse link 18 70,903,528 70,924,434 RGD:6480464
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19716
    role 19663
      biological role 19661
        osmolyte 2003
          glycerol 1746
            glycerolipid 246
              glycerophospholipid 196
                glycerophosphocholine 115
                  lysophosphatidylcholine 27
                    1-O-acyl-sn-glycero-3-phosphocholine(1+) + 0
                    1-acylglycerophosphocholine(1+) + 0
                    1-lysophosphatidylcholine + 0
                    2-acylglycerophosphocholine + 0
                    2-lysophosphatidylcholine + 4
                    LysoPC(18:3(6Z,9Z,12Z)) 0
                    LysoPC(18:3(9Z,12Z,15Z)) 0
                    LysoPC(18:4(6Z,9Z,12Z,15Z)) 0
                    LysoPC(20:5(5Z,8Z,11Z,14Z,17Z)) 0
                    LysoPC(22:1(13Z)) 0
                    LysoPC(22:2(13Z,16Z)) 0
                    LysoPC(24:1(15Z)) 0
                    acyl-sn-glycero-3-phosphocholine + 4
                    lysophosphatidylcholine 12:0 0
                    lysophosphatidylcholine 14:0 + 0
                    lysophosphatidylcholine 14:1 + 0
                    lysophosphatidylcholine 14:2 0
                    lysophosphatidylcholine 15:0 + 0
                    lysophosphatidylcholine 15:2 0
                    lysophosphatidylcholine 16:0 + 0
                    lysophosphatidylcholine 16:1 + 0
                    lysophosphatidylcholine 16:2 0
                    lysophosphatidylcholine 17:0 + 0
                    lysophosphatidylcholine 17:1 + 0
                    lysophosphatidylcholine 18:0 + 2
                    lysophosphatidylcholine 18:1 + 2
                    lysophosphatidylcholine 18:2 + 0
                    lysophosphatidylcholine 18:3 + 0
                    lysophosphatidylcholine 18:4 + 0
                    lysophosphatidylcholine 19:0 + 0
                    lysophosphatidylcholine 20:0 + 0
                    lysophosphatidylcholine 20:1 + 0
                    lysophosphatidylcholine 20:2 + 0
                    lysophosphatidylcholine 20:3 + 0
                    lysophosphatidylcholine 20:4 + 0
                    lysophosphatidylcholine 20:5 + 0
                    lysophosphatidylcholine 22:0 0
                    lysophosphatidylcholine 22:1 0
                    lysophosphatidylcholine 22:2 0
                    lysophosphatidylcholine 22:4 + 0
                    lysophosphatidylcholine 22:5 + 0
                    lysophosphatidylcholine 22:6 + 0
                    lysophosphatidylcholine 24:0 + 0
                    lysophosphatidylcholine 24:1 0
                    lysophosphatidylcholine 26:0 0
                    lysophosphatidylcholine 26:1 0
                    lysophosphatidylcholine 28:0 0
                    lysophosphatidylcholine 28:1 0
                    lysophosphatidylcholine 6:0 + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19716
    subatomic particle 19712
      composite particle 19712
        hadron 19712
          baryon 19712
            nucleon 19712
              atomic nucleus 19712
                atom 19712
                  main group element atom 19598
                    p-block element atom 19598
                      chalcogen 19301
                        oxygen atom 19261
                          oxygen molecular entity 19261
                            hydroxides 19013
                              oxoacid 18094
                                pnictogen oxoacid 9848
                                  phosphorus oxoacid 8669
                                    phosphoric acids 7336
                                      phosphoric acid 7336
                                        phosphoric acid derivative 6985
                                          phosphate 6985
                                            organic phosphate 6984
                                              phospholipid 287
                                                glycerophospholipid 196
                                                  glycerophosphocholine 115
                                                    lysophosphatidylcholine 27
                                                      1-O-acyl-sn-glycero-3-phosphocholine(1+) + 0
                                                      1-acylglycerophosphocholine(1+) + 0
                                                      1-lysophosphatidylcholine + 0
                                                      2-acylglycerophosphocholine + 0
                                                      2-lysophosphatidylcholine + 4
                                                      LysoPC(18:3(6Z,9Z,12Z)) 0
                                                      LysoPC(18:3(9Z,12Z,15Z)) 0
                                                      LysoPC(18:4(6Z,9Z,12Z,15Z)) 0
                                                      LysoPC(20:5(5Z,8Z,11Z,14Z,17Z)) 0
                                                      LysoPC(22:1(13Z)) 0
                                                      LysoPC(22:2(13Z,16Z)) 0
                                                      LysoPC(24:1(15Z)) 0
                                                      acyl-sn-glycero-3-phosphocholine + 4
                                                      lysophosphatidylcholine 12:0 0
                                                      lysophosphatidylcholine 14:0 + 0
                                                      lysophosphatidylcholine 14:1 + 0
                                                      lysophosphatidylcholine 14:2 0
                                                      lysophosphatidylcholine 15:0 + 0
                                                      lysophosphatidylcholine 15:2 0
                                                      lysophosphatidylcholine 16:0 + 0
                                                      lysophosphatidylcholine 16:1 + 0
                                                      lysophosphatidylcholine 16:2 0
                                                      lysophosphatidylcholine 17:0 + 0
                                                      lysophosphatidylcholine 17:1 + 0
                                                      lysophosphatidylcholine 18:0 + 2
                                                      lysophosphatidylcholine 18:1 + 2
                                                      lysophosphatidylcholine 18:2 + 0
                                                      lysophosphatidylcholine 18:3 + 0
                                                      lysophosphatidylcholine 18:4 + 0
                                                      lysophosphatidylcholine 19:0 + 0
                                                      lysophosphatidylcholine 20:0 + 0
                                                      lysophosphatidylcholine 20:1 + 0
                                                      lysophosphatidylcholine 20:2 + 0
                                                      lysophosphatidylcholine 20:3 + 0
                                                      lysophosphatidylcholine 20:4 + 0
                                                      lysophosphatidylcholine 20:5 + 0
                                                      lysophosphatidylcholine 22:0 0
                                                      lysophosphatidylcholine 22:1 0
                                                      lysophosphatidylcholine 22:2 0
                                                      lysophosphatidylcholine 22:4 + 0
                                                      lysophosphatidylcholine 22:5 + 0
                                                      lysophosphatidylcholine 22:6 + 0
                                                      lysophosphatidylcholine 24:0 + 0
                                                      lysophosphatidylcholine 24:1 0
                                                      lysophosphatidylcholine 26:0 0
                                                      lysophosphatidylcholine 26:1 0
                                                      lysophosphatidylcholine 28:0 0
                                                      lysophosphatidylcholine 28:1 0
                                                      lysophosphatidylcholine 6:0 + 0
paths to the root

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