Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:imidazolium ion
go back to main search page
Accession:CHEBI:59964 term browser browse the term
Definition:The cation resulting from protonation or quaternisation at the 3-position of any 1H-imidazole.
Synonyms:related_synonym: imidazolium ions;   imidazoliums



show annotations for term's descendants           Sort by:
 
calmidazolium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp3 caspase 3 increases activity ISO calmidazolium results in increased activity of CASP3 protein CTD PMID:27247146 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 multiple interactions ISO calmidazolium inhibits the reaction [Potassium results in increased expression of CYP11B2 mRNA] CTD PMID:12193581 NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048
JBrowse link
G F2 coagulation factor II multiple interactions ISO calmidazolium affects the reaction [F2 protein results in increased secretion of Adenosine Triphosphate] CTD PMID:2030746 NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486
JBrowse link
G Il1b interleukin 1 beta multiple interactions ISO calmidazolium inhibits the reaction [IL1B protein results in increased expression of VCAM1 protein] CTD PMID:19281832 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Mt1 metallothionein 1 increases expression EXP calmidazolium results in increased expression of MT1A mRNA CTD PMID:8128501 NCBI chr19:10,826,032...10,827,048
Ensembl chr19:10,826,032...10,827,049
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor decreases expression ISO calmidazolium results in decreased expression of MYC CTD PMID:27247146 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myl9 myosin light chain 9 decreases phosphorylation EXP calmidazolium results in decreased phosphorylation of MYL9 protein CTD PMID:17272349 NCBI chr 3:145,281,943...145,288,333
Ensembl chr 3:145,281,937...145,288,333
JBrowse link
G Ngf nerve growth factor multiple interactions EXP calmidazolium inhibits the reaction [NGF protein results in increased uptake of Calcium] CTD PMID:1374475 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
JBrowse link
G Nos3 nitric oxide synthase 3 decreases activity EXP calmidazolium results in decreased activity of NOS3 protein CTD PMID:1374468 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
G Rb1 RB transcriptional corepressor 1 decreases phosphorylation ISO calmidazolium results in decreased phosphorylation of RB1 protein CTD PMID:12901840 PMID:15708436 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
G Rbl2 RB transcriptional corepressor like 2 decreases phosphorylation ISO calmidazolium results in decreased phosphorylation of RBL2 protein CTD PMID:15708436 NCBI chr19:15,876,852...15,923,632
Ensembl chr19:15,876,853...15,923,572
JBrowse link
G Slc5a6 solute carrier family 5 member 6 multiple interactions ISO calmidazolium inhibits the reaction [SLC5A6 protein results in increased transport of Biotin] CTD PMID:15561972 NCBI chr 6:25,319,187...25,331,713
Ensembl chr 6:25,320,442...25,331,712
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 multiple interactions ISO calmidazolium inhibits the reaction [IL1B protein results in increased expression of VCAM1 protein] CTD PMID:19281832 NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20083
    chemical entity 20082
      molecular entity 20080
        ion 16487
          organic ion 9182
            organic cation 8123
              imidazolium ion 13
                1,3-dimethyl-2-[(2-oxopropyl)thio]imidazolium + 0
                1-alkyl-3-methylimidazolium + 0
                2-chloroimidazolium ion 0
                5-aminoimidazol-3-ium ribonucleoside 0
                calmidazolium 13
                glyoxal-lysine dimer 0
                imidazolium cation 0
                methylglyoxal-lysine dimer 0
                neticonazole(1+) + 0
                oxiconazole(1+) + 0
                tetryzoline(1+) + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 20083
    subatomic particle 20081
      composite particle 20081
        hadron 20081
          baryon 20081
            nucleon 20081
              atomic nucleus 20081
                atom 20081
                  main group element atom 19982
                    main group molecular entity 19982
                      p-block molecular entity 19982
                        carbon group molecular entity 19909
                          organic molecular entity 19902
                            organic ion 9182
                              organic cation 8123
                                imidazolium ion 13
                                  1,3-dimethyl-2-[(2-oxopropyl)thio]imidazolium + 0
                                  1-alkyl-3-methylimidazolium + 0
                                  2-chloroimidazolium ion 0
                                  5-aminoimidazol-3-ium ribonucleoside 0
                                  calmidazolium 13
                                  glyoxal-lysine dimer 0
                                  imidazolium cation 0
                                  methylglyoxal-lysine dimer 0
                                  neticonazole(1+) + 0
                                  oxiconazole(1+) + 0
                                  tetryzoline(1+) + 0
paths to the root