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ONTOLOGY REPORT - ANNOTATIONS


Term:lipoarabinomannan
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Accession:CHEBI:59524 term browser browse the term
Definition:A glycolipid comprising a glycosylphosphatidyl-myo-inositol-anchored lipoglycan; a virulence factor associated with Mycobacterium tuberculosis.
Synonyms:related_synonym: LAM;   LAMs;   lipoarabinomannans
 xref_mesh: MESH:C050016
 xref: PMID:12063260 "Europe PMC";   PMID:12368438 "Europe PMC";   PMID:18344361 "Europe PMC";   PMID:19004785 "Europe PMC";   PMID:7797482 "Europe PMC";   Wikipedia:Lipoarabinomannan


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lipoarabinomannan term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:6480464
G Cxcr2 C-X-C motif chemokine receptor 2 JBrowse link 9 81,427,275 81,435,065 RGD:6480464
G Il12b interleukin 12B JBrowse link 10 30,034,447 30,048,774 RGD:6480464
G Irak1 interleukin-1 receptor-associated kinase 1 JBrowse link X 156,716,469 156,726,367 RGD:6480464
G Irak3 interleukin-1 receptor-associated kinase 3 JBrowse link 7 64,922,830 64,982,224 RGD:6480464
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:6480464
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link 2 240,773,520 240,890,053 RGD:6480464
G Nfkbia NFKB inhibitor alpha JBrowse link 6 76,267,227 76,270,457 RGD:6480464
G Rel REL proto-oncogene, NF-kB subunit JBrowse link 14 108,490,794 108,517,582 RGD:6480464
G Traf6 TNF receptor associated factor 6 JBrowse link 3 91,252,829 91,271,607 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19748
    role 19695
      biological role 19693
        antigen 109
          lipoarabinomannan 10
Path 2
Term Annotations click to browse term
  CHEBI ontology 19748
    subatomic particle 19744
      composite particle 19744
        hadron 19744
          baryon 19744
            nucleon 19744
              atomic nucleus 19744
                atom 19744
                  main group element atom 19628
                    p-block element atom 19628
                      chalcogen 19337
                        oxygen atom 19298
                          oxygen molecular entity 19298
                            hydroxides 19053
                              oxoacid 18117
                                pnictogen oxoacid 9850
                                  phosphorus oxoacid 8673
                                    phosphoric acids 7343
                                      phosphoric acid 7343
                                        phosphoric acid derivative 6994
                                          phosphate 6994
                                            organic phosphate 6993
                                              phospholipid 288
                                                glycerophospholipid 196
                                                  glycerophosphoinositol 19
                                                    phosphatidylinositol 19
                                                      glycosylphosphatidylinositol 17
                                                        lipoarabinomannan 10
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.