Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:hydroxycitronellal
go back to main search page
Accession:CHEBI:53459 term browser browse the term
Definition:The tertiary alcohol arising from addition of water across the C=C double bond of citronellal.
Synonyms:exact_synonym: 7-hydroxy-3,7-dimethyloctanal
 related_synonym: 3,7-Dimethyl-7-hydroxyoctanal;   3,7-dimethyl-7-hydroxyoctan-1-al;   7-hydroxycitronellal;   Citronellal hydrate;   Formula=C10H20O2;   InChI=1S/C10H20O2/c1-9(6-8-11)5-4-7-10(2,3)12/h8-9,12H,4-7H2,1-3H3;   InChIKey=WPFVBOQKRVRMJB-UHFFFAOYSA-N;   SMILES=[H]C(=O)CC(C)CCCC(C)(C)O;   hydroxy citronellal
 xref: Beilstein:1721290;   CAS:107-75-5;   HMDB:HMDB0031739
 xref_mesh: MESH:C020755
 xref: PMID:12786728;   PMID:14678209;   PMID:17598033;   PMID:17936526;   PMID:19243479;   PMID:20495907;   PMID:20795681;   PMID:21392029;   PMID:2808836;   PMID:3264801;   PMID:455972;   PMID:467024;   PMID:8681536;   PMID:8735869;   PMID:8879930;   Reaxys:1721290


show annotations for term's descendants           Sort by:
 
hydroxycitronellal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr7 C-C motif chemokine receptor 7 increases expression ISO hydroxycitronellal results in increased expression of CCR7 mRNA CTD PMID:17936526 NCBI chr10:87,057,335...87,067,444
Ensembl chr10:87,057,136...87,067,456
JBrowse link
G Cd80 Cd80 molecule increases expression ISO hydroxycitronellal results in increased expression of CD80 mRNA CTD PMID:17936526 NCBI chr11:64,815,201...64,855,293
Ensembl chr11:64,827,635...64,855,353
JBrowse link
G Cd86 CD86 molecule increases expression ISO hydroxycitronellal results in increased expression of CD86 protein CTD PMID:31958493 NCBI chr11:67,060,305...67,117,990
Ensembl chr11:67,082,193...67,118,795
JBrowse link
G Hmox1 heme oxygenase 1 increases expression ISO hydroxycitronellal results in increased expression of HMOX1 mRNA CTD PMID:20491607 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456
JBrowse link
G Maff MAF bZIP transcription factor F increases expression ISO hydroxycitronellal results in increased expression of MAFF mRNA CTD PMID:20491607 NCBI chr 7:120,580,743...120,592,095
Ensembl chr 7:120,580,743...120,592,095
JBrowse link
G Mt1 metallothionein 1 increases expression ISO hydroxycitronellal results in increased expression of MT1A mRNA CTD PMID:20491607 NCBI chr19:11,301,991...11,303,007
Ensembl chr17:78,793,336...78,793,724
JBrowse link
G Mt2A metallothionein 2A increases expression ISO hydroxycitronellal results in increased expression of MT2A mRNA CTD PMID:20491607 NCBI chr19:11,307,966...11,308,740
Ensembl chr19:11,307,967...11,308,740
JBrowse link
G Tlr2 toll-like receptor 2 increases expression ISO hydroxycitronellal results in increased expression of TLR2 mRNA CTD PMID:17936526 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Tnf tumor necrosis factor increases secretion ISO hydroxycitronellal results in increased secretion of TNF protein CTD PMID:17118622 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Txn1 thioredoxin 1 increases expression ISO hydroxycitronellal results in increased expression of TXN mRNA CTD PMID:20491607 NCBI chr 5:75,049,735...75,057,731
Ensembl chr 5:75,049,747...75,057,752
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19785
    role 19732
      application 19391
        fragrance 848
          hydroxycitronellal 10
Path 2
Term Annotations click to browse term
  CHEBI ontology 19785
    subatomic particle 19782
      composite particle 19782
        hadron 19782
          baryon 19782
            nucleon 19782
              atomic nucleus 19782
                atom 19782
                  main group element atom 19670
                    p-block element atom 19670
                      carbon group element atom 19572
                        carbon atom 19561
                          organic molecular entity 19561
                            organic group 18493
                              organic divalent group 18486
                                organodiyl group 18486
                                  carbonyl group 18389
                                    carbonyl compound 18389
                                      carboxylic acid 18060
                                        carboacyl group 17346
                                          univalent carboacyl group 17346
                                            formyl group 7845
                                              aldehyde 7845
                                                citronellal 22
                                                  hydroxycitronellal 10
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.