CHEBI ONTOLOGY - ANNOTATIONS
The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/ . The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/ ). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term: apo carotenoid
Accession: CHEBI:53183
browse the term
Definition: A compound arising from loss of part of the carotene skeleton (excluding retinoids)
Synonyms: related_synonym: apo carotenoids; apocarotenoid; apocarotenoids
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Ccl2
C-C motif chemokine ligand 2
increases secretion multiple interactions
ISO
CCL2 protein results in increased secretion of Abscisic Acid fluridone inhibits the reaction [CCL2 protein results in increased secretion of Abscisic Acid]
CTD
PMID:24211328
NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
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Acadm
acyl-CoA dehydrogenase medium chain
increases expression
ISO
apocarotenal results in increased expression of ACADM mRNA
CTD
PMID:17034753
NCBI chr 2:260,124,418...260,148,589
Ensembl chr 2:260,124,418...260,148,589
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Adh5
alcohol dehydrogenase 5 (class III), chi polypeptide
increases expression
ISO
apocarotenal results in increased expression of ADH5 mRNA
CTD
PMID:17034753
NCBI chr 2:243,728,500...243,740,907
Ensembl chr 2:243,700,784...243,740,899
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Aldh1b1
aldehyde dehydrogenase 1 family, member B1
decreases expression
ISO
apocarotenal results in decreased expression of ALDH1B1 mRNA
CTD
PMID:17034753
NCBI chr 5:61,382,351...61,387,359
Ensembl chr 5:61,382,351...61,387,358
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Aldh3b1
aldehyde dehydrogenase 3 family, member B1
decreases expression
ISO
apocarotenal results in decreased expression of ALDH3B1 mRNA
CTD
PMID:17034753
NCBI chr 1:219,145,457...219,181,536
Ensembl chr 1:219,145,459...219,186,860
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Aldh4a1
aldehyde dehydrogenase 4 family, member A1
decreases expression
ISO
apocarotenal results in decreased expression of ALDH4A1 mRNA
CTD
PMID:17034753
NCBI chr 5:158,090,238...158,115,725
Ensembl chr 5:158,042,587...158,135,733
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Ank2
ankyrin 2
increases expression
ISO
apocarotenal results in increased expression of ANK2 mRNA
CTD
PMID:17034753
NCBI chr 2:231,224,643...231,522,655
Ensembl chr 2:231,226,949...231,648,122
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Ank3
ankyrin 3
increases expression
ISO
apocarotenal results in increased expression of ANK3 mRNA
CTD
PMID:17034753
NCBI chr20:19,948,767...20,480,628
Ensembl chr20:20,105,047...20,480,623
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Asah1
N-acylsphingosine amidohydrolase 1
increases expression
ISO
apocarotenal results in increased expression of ASAH1 mRNA
CTD
PMID:17034753
NCBI chr16:53,998,604...54,030,006
Ensembl chr16:53,998,560...54,040,836
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Asb1
ankyrin repeat and SOCS box-containing 1
increases expression
ISO
apocarotenal results in increased expression of ASB1 mRNA
CTD
PMID:17034753
NCBI chr 9:98,668,231...98,689,471
Ensembl chr 9:98,668,231...98,684,900
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Asb9
ankyrin repeat and SOCS box-containing 9
increases expression
ISO
apocarotenal results in increased expression of ASB9 mRNA
CTD
PMID:17034753
NCBI chr X:31,700,637...31,745,790
Ensembl chr X:31,700,633...31,780,425
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Bax
BCL2 associated X, apoptosis regulator
decreases expression
ISO
apocarotenal results in decreased expression of BAX mRNA
CTD
PMID:17034753
NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
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Bco2
beta-carotene oxygenase 2
multiple interactions
ISO
[BCO2 protein results in increased metabolism of beta Carotene] which results in increased chemical synthesis of apocarotenal; [BCO2 protein results in increased metabolism of Cryptoxanthins] which results in increased chemical synthesis of apocarotenal; [BCO2 protein results in increased metabolism of Lutein] which results in increased chemical synthesis of apocarotenal metabolite; [BCO2 protein results in increased metabolism of Zeaxanthins] which results in increased chemical synthesis of apocarotenal metabolite
CTD
PMID:21106934
NCBI chr 8:54,965,577...54,990,604
Ensembl chr 8:54,965,583...54,998,864
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Casp8ap2
caspase 8 associated protein 2
increases expression
ISO
apocarotenal results in increased expression of CASP8AP2 mRNA
CTD
PMID:17034753
NCBI chr 5:47,853,699...47,891,147
Ensembl chr 5:47,853,818...47,891,668
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Cdh1
cadherin 1
increases expression
ISO
apocarotenal results in increased expression of CDH1 mRNA
CTD
PMID:17034753
NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
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Cldn10
claudin 10
increases expression
ISO
apocarotenal results in increased expression of CLDN10 mRNA
CTD
PMID:17034753
NCBI chr15:104,026,590...104,115,748
Ensembl chr15:104,026,601...104,115,748
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Cldn18
claudin 18
increases expression
ISO
apocarotenal results in increased expression of CLDN18 mRNA
CTD
PMID:17034753
NCBI chr 8:107,933,725...107,960,656
Ensembl chr 8:107,934,860...107,952,530
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Col1a1
collagen type I alpha 1 chain
decreases expression
ISO
apocarotenal results in decreased expression of COL1A1 mRNA
CTD
PMID:17034753
NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
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Col4a1
collagen type IV alpha 1 chain
decreases expression
ISO
apocarotenal results in decreased expression of COL4A1 mRNA
CTD
PMID:17034753
NCBI chr16:83,522,162...83,632,153
Ensembl chr16:83,522,162...83,632,153
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Col4a2
collagen type IV alpha 2 chain
decreases expression
ISO
apocarotenal results in decreased expression of COL4A2 mRNA
CTD
PMID:17034753
NCBI chr16:83,386,388...83,522,169
Ensembl chr16:83,387,364...83,438,561
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Crabp2
cellular retinoic acid binding protein 2
decreases expression
ISO
apocarotenal results in decreased expression of CRABP2 mRNA
CTD
PMID:17034753
NCBI chr 2:187,322,416...187,326,794
Ensembl chr 2:184,882,969...184,883,505
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Ctsb
cathepsin B
decreases expression
ISO
apocarotenal results in decreased expression of CTSB mRNA
CTD
PMID:17034753
NCBI chr15:46,316,741...46,337,613
Ensembl chr15:46,316,741...46,337,612
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Cxcl12
C-X-C motif chemokine ligand 12
increases expression
ISO
apocarotenal results in increased expression of CXCL12 mRNA
CTD
PMID:17034753
NCBI chr 4:149,261,044...149,273,891
Ensembl chr 4:149,261,044...149,273,891
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Cxcl6
C-X-C motif chemokine ligand 6
increases expression
ISO
apocarotenal results in increased expression of CXCL6 mRNA
CTD
PMID:17034753
NCBI chr14:18,860,201...18,920,839
Ensembl chr14:18,860,264...18,862,407
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Cxcl9
C-X-C motif chemokine ligand 9
increases expression
ISO
apocarotenal results in increased expression of CXCL9 mRNA
CTD
PMID:17034753
NCBI chr14:17,228,832...17,233,743
Ensembl chr14:17,228,856...17,234,712
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Cxcr4
C-X-C motif chemokine receptor 4
increases expression
ISO
apocarotenal results in increased expression of CXCR4 mRNA
CTD
PMID:17034753
NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
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Cyp2c11
cytochrome P450, subfamily 2, polypeptide 11
increases expression
ISO
apocarotenal results in increased expression of CYP2C9 mRNA
CTD
PMID:17034753
NCBI chr 1:257,676,172...258,004,428
Ensembl chr 1:257,970,345...258,004,434
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Dlx2
distal-less homeobox 2
increases expression
ISO
apocarotenal results in increased expression of DLX2 mRNA
CTD
PMID:17034753
NCBI chr 3:58,180,088...58,181,971
Ensembl chr 3:58,180,088...58,181,971
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Dlx4
distal-less homeobox 4
increases expression
ISO
apocarotenal results in increased expression of DLX4 mRNA
CTD
PMID:17034753
NCBI chr10:82,958,525...82,963,919
Ensembl chr10:82,958,525...82,963,919
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Ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit
decreases expression
ISO
apocarotenal results in decreased expression of ERCC2 mRNA
CTD
PMID:17034753
NCBI chr 1:80,293,574...80,307,334
Ensembl chr 1:80,293,566...80,307,344
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Ets1
ETS proto-oncogene 1, transcription factor
decreases expression
ISO
apocarotenal results in decreased expression of ETS1 mRNA
CTD
PMID:17034753
NCBI chr 8:33,756,634...33,879,625
Ensembl chr 8:33,816,386...33,879,625
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Fas
Fas cell surface death receptor
increases expression
ISO
apocarotenal results in increased expression of FAS mRNA
CTD
PMID:17034753
NCBI chr 1:252,589,785...252,624,790
Ensembl chr 1:252,589,785...252,624,790
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Fasn
fatty acid synthase
decreases expression
ISO
apocarotenal results in decreased expression of FASN mRNA
CTD
PMID:17034753
NCBI chr10:109,987,735...110,005,901
Ensembl chr10:109,987,735...110,005,901
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Gata6
GATA binding protein 6
increases expression
ISO
apocarotenal results in increased expression of GATA6 mRNA
CTD
PMID:17034753
NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
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Gbp1
guanylate binding protein 1
increases expression
ISO
apocarotenal results in increased expression of GBP1 mRNA
CTD
PMID:17034753
NCBI chr 2:248,343,334...248,423,402
Ensembl chr 2:248,398,917...248,409,570
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Gstk1
glutathione S-transferase kappa 1
decreases expression
ISO
apocarotenal results in decreased expression of GSTK1 mRNA
CTD
PMID:17034753
NCBI chr 4:71,621,777...71,626,096
Ensembl chr 4:71,621,729...71,626,107
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Gstm2
glutathione S-transferase mu 2
decreases expression
ISO
apocarotenal results in decreased expression of GSTM2 mRNA
CTD
PMID:17034753
NCBI chr 2:210,778,041...210,782,807
Ensembl chr 2:210,720,704...210,782,856
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Gstm3l
glutathione S-transferase mu 3-like
increases expression
ISO
apocarotenal results in increased expression of GSTM5 mRNA
CTD
PMID:17034753
NCBI chr 2:210,761,729...210,766,501
Ensembl chr 2:210,761,729...210,766,501
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Gstm4
glutathione S-transferase mu 4
decreases expression
ISO
apocarotenal results in decreased expression of GSTM4 mRNA
CTD
PMID:17034753
NCBI chr 2:210,834,013...210,839,242
Ensembl chr 2:210,833,884...210,839,295
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Gstz1
glutathione S-transferase zeta 1
decreases expression
ISO
apocarotenal results in decreased expression of GSTZ1 mRNA
CTD
PMID:17034753
NCBI chr 6:111,176,798...111,187,246
Ensembl chr 6:111,176,798...111,187,244
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Hoxa7
homeobox A7
increases expression
ISO
apocarotenal results in increased expression of HOXA7 mRNA
CTD
PMID:17034753
NCBI chr 4:82,184,299...82,187,890
Ensembl chr 4:82,183,196...82,186,190
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Hoxb6
homeo box B6
increases expression
ISO
apocarotenal results in increased expression of HOXB6 mRNA
CTD
PMID:17034753
NCBI chr10:84,147,331...84,150,238
Ensembl chr10:84,147,836...84,149,600
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Hoxc10
homeo box C10
increases expression
ISO
apocarotenal results in increased expression of HOXC10 mRNA
CTD
PMID:17034753
NCBI chr 7:144,577,578...144,582,802
Ensembl chr 7:144,577,465...144,582,622
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Ifna1
interferon, alpha 1
increases expression
ISO
apocarotenal results in increased expression of IFNA14 mRNA
CTD
PMID:17034753
NCBI chr 5:106,951,822...106,952,908
Ensembl chr 5:106,952,082...106,952,792
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Irf8
interferon regulatory factor 8
increases expression
ISO
apocarotenal results in increased expression of IRF8 mRNA
CTD
PMID:17034753
NCBI chr19:54,314,859...54,336,643
Ensembl chr19:54,314,865...54,336,640
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Irx4
iroquois homeobox 4
decreases expression
ISO
apocarotenal results in decreased expression of IRX4 mRNA
CTD
PMID:17034753
NCBI chr 1:32,634,774...32,645,151
Ensembl chr 1:32,634,796...32,643,771
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Itgb4
integrin subunit beta 4
decreases expression
ISO
apocarotenal results in decreased expression of ITGB4 mRNA
CTD
PMID:17034753
NCBI chr10:104,524,000...104,560,180
Ensembl chr10:104,523,996...104,561,078
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Ivl
involucrin
increases expression
ISO
apocarotenal results in increased expression of IVL mRNA
CTD
PMID:17034753
NCBI chr 2:192,761,171...192,773,346
Ensembl chr 2:192,761,538...192,763,577
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Krt17
keratin 17
decreases expression
ISO
apocarotenal results in decreased expression of KRT17 mRNA
CTD
PMID:17034753
NCBI chr10:88,158,993...88,163,712
Ensembl chr10:88,118,001...88,163,723
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Krt2
keratin 2
increases expression
ISO
apocarotenal results in increased expression of KRT2 mRNA
CTD
PMID:17034753
NCBI chr 7:143,412,858...143,420,463
Ensembl chr 7:143,412,858...143,420,027
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Krt7
keratin 7
affects expression
ISO
apocarotenal affects the expression of KRT7 mRNA
CTD
PMID:17034753
NCBI chr 7:143,059,731...143,075,907
Ensembl chr 7:143,059,764...143,075,907
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Lhx3
LIM homeobox 3
increases expression
ISO
apocarotenal results in increased expression of LHX3 mRNA
CTD
PMID:17034753
NCBI chr 3:3,653,861...3,662,509
Ensembl chr 3:3,654,755...3,661,810
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Mcl1
MCL1 apoptosis regulator, BCL2 family member
affects expression
ISO
apocarotenal affects the expression of MCL1 mRNA
CTD
PMID:17034753
NCBI chr 2:197,786,212...197,788,992
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Meis2
Meis homeobox 2
increases expression
ISO
apocarotenal results in increased expression of MEIS2 mRNA
CTD
PMID:17034753
NCBI chr 3:107,560,172...107,762,732
Ensembl chr 3:107,559,997...107,760,589
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Meox1
mesenchyme homeobox 1
increases expression
ISO
apocarotenal results in increased expression of MEOX1 mRNA
CTD
PMID:17034753
NCBI chr10:89,797,011...89,817,009
Ensembl chr10:89,797,038...89,816,491
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Mnx1
motor neuron and pancreas homeobox 1
increases expression
ISO
apocarotenal results in increased expression of MNX1 mRNA
CTD
PMID:17034753
NCBI chr 4:2,376,350...2,381,308
Ensembl chr 4:2,376,958...2,381,271
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Msh5
mutS homolog 5
increases expression
ISO
apocarotenal results in increased expression of MSH5 mRNA
CTD
PMID:17034753
NCBI chr20:5,020,690...5,037,125
Ensembl chr20:5,020,667...5,037,088
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Muc5ac
mucin 5AC, oligomeric mucus/gel-forming
increases expression
ISO
apocarotenal results in increased expression of MUC5AC mRNA
CTD
PMID:17034753
NCBI chr 1:214,725,482...214,756,653
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Nos1
nitric oxide synthase 1
increases expression
ISO
apocarotenal results in increased expression of NOS1 mRNA
CTD
PMID:17034753
NCBI chr12:44,214,949...44,405,530
Ensembl chr12:44,213,943...44,520,341
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Olr1
oxidized low density lipoprotein receptor 1
increases expression
ISO
apocarotenal results in increased expression of OLR1 mRNA
CTD
PMID:17034753
NCBI chr 4:163,239,853...163,261,937
Ensembl chr 4:163,239,849...163,261,958
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Pcdhgc3
protocadherin gamma subfamily C, 3
increases expression
ISO
apocarotenal results in increased expression of PCDHGC3 mRNA
CTD
PMID:17034753
NCBI chr18:30,954,552...30,971,113
Ensembl chr18:30,913,842...30,969,361
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Plscr1
phospholipid scramblase 1
increases expression
ISO
apocarotenal results in increased expression of PLSCR1 mRNA
CTD
PMID:17034753
NCBI chr 8:99,625,523...99,645,882
Ensembl chr 8:99,625,545...99,725,217
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Plscr3
phospholipid scramblase 3
increases expression
ISO
apocarotenal results in increased expression of PLSCR3 mRNA
CTD
PMID:17034753
NCBI chr10:56,452,632...56,458,390
Ensembl chr10:56,453,877...56,458,390
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Plscr4
phospholipid scramblase 4
increases expression
ISO
apocarotenal results in increased expression of PLSCR4 mRNA
CTD
PMID:17034753
NCBI chr 8:99,880,073...99,917,733
Ensembl chr 8:99,880,073...99,918,825
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Rad51ap1
RAD51 associated protein 1
increases expression
ISO
apocarotenal results in increased expression of RAD51AP1 mRNA
CTD
PMID:17034753
NCBI chr 4:159,469,803...159,482,869
Ensembl chr 4:159,469,804...159,482,869
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Rad51d
RAD51 paralog D
increases expression
ISO
apocarotenal results in increased expression of RAD51D mRNA
CTD
PMID:17034753
NCBI chr10:70,222,703...70,241,352
Ensembl chr10:70,227,163...70,241,254
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Rara
retinoic acid receptor, alpha
decreases expression
ISO
apocarotenal results in decreased expression of RARA mRNA
CTD
PMID:17034753
NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
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Rarb
retinoic acid receptor, beta
increases expression
ISO
apocarotenal results in increased expression of RARB mRNA
CTD
PMID:17034753
NCBI chr15:9,915,223...10,262,599
Ensembl chr15:10,120,206...10,262,599
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Rarres1
retinoic acid receptor responder 1
increases expression
ISO
apocarotenal results in increased expression of RARRES1 mRNA
CTD
PMID:17034753
NCBI chr 2:164,650,722...164,684,982
Ensembl chr 2:164,650,722...164,684,985
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Six6
SIX homeobox 6
increases expression
ISO
apocarotenal results in increased expression of SIX6 mRNA
CTD
PMID:17034753
NCBI chr 6:95,816,749...95,821,729
Ensembl chr 6:95,816,749...95,821,729
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Sod1
superoxide dismutase 1
decreases expression
ISO
apocarotenal results in decreased expression of SOD1 mRNA
CTD
PMID:17034753
NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
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Sptlc2
serine palmitoyltransferase, long chain base subunit 2
affects expression
ISO
apocarotenal affects the expression of SPTLC2 mRNA
CTD
PMID:17034753
NCBI chr 6:111,334,408...111,417,960
Ensembl chr 6:111,339,136...111,417,954
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Srebf1
sterol regulatory element binding transcription factor 1
increases expression
ISO
apocarotenal results in increased expression of SREBF1 mRNA
CTD
PMID:17034753
NCBI chr10:46,570,996...46,593,021
Ensembl chr10:46,570,996...46,593,009
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Tgm4
transglutaminase 4
increases expression
ISO
apocarotenal results in increased expression of TGM4 mRNA
CTD
PMID:17034753
NCBI chr 8:132,117,279...132,157,485
Ensembl chr 8:132,120,452...132,157,485
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Tnfrsf9
TNF receptor superfamily member 9
increases expression
ISO
apocarotenal results in increased expression of TNFRSF9 mRNA
CTD
PMID:17034753
NCBI chr 5:168,009,245...168,035,813
Ensembl chr 5:168,009,393...168,035,810
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Tnfsf10
TNF superfamily member 10
increases expression
ISO
apocarotenal results in increased expression of TNFSF10 mRNA
CTD
PMID:17034753
NCBI chr 2:113,008,008...113,026,899
Ensembl chr 2:113,007,549...113,026,899
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Txndc9
thioredoxin domain containing 9
increases expression
ISO
apocarotenal results in increased expression of TXNDC9 mRNA
CTD
PMID:17034753
NCBI chr 9:44,647,707...44,657,779
Ensembl chr 9:44,647,707...44,657,779
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Xrcc3
X-ray repair cross complementing 3
increases expression
ISO
apocarotenal results in increased expression of XRCC3 mRNA
CTD
PMID:17034753
NCBI chr 6:136,366,917...136,380,751
Ensembl chr 6:136,371,555...136,379,348
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Gna15
G protein subunit alpha 15
increases response to substance multiple interactions
ISO
GNA15 protein results in increased susceptibility to alpha-ionone [GNA15 protein results in increased susceptibility to alpha-ionone] which results in increased activity of OLFR43 protein
CTD
PMID:15598656
NCBI chr 7:11,054,249...11,075,152
Ensembl chr 7:11,054,333...11,077,251
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Olr1513
olfactory receptor 1513
multiple interactions
ISO
[GNA15 protein results in increased susceptibility to alpha-ionone] which results in increased activity of OLFR43 protein
CTD
PMID:15598656
NCBI chr10:61,033,113...61,034,051
Ensembl chr10:61,033,113...61,034,051
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Olr59
olfactory receptor 59
decreases activity
ISO
alpha-ionone results in decreased activity of OR51E2 protein
CTD
PMID:27226631
NCBI chr 1:167,906,030...167,940,688
Ensembl chr 1:167,906,061...167,911,961
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Calml5
calmodulin-like 5
increases expression
ISO
beta-damascenone results in increased expression of CALM4 mRNA
CTD
PMID:22982537
NCBI chr17:70,044,956...70,045,886
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Casp14
caspase 14
increases expression affects localization
ISO
beta-damascenone results in increased expression of CASP14 mRNA beta-damascenone affects the localization of CASP14 protein
CTD
PMID:22982537
NCBI chr 7:13,938,376...13,944,286
Ensembl chr 7:13,938,302...13,945,130
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Ces3a
carboxylesterase 3a
increases expression
ISO
beta-damascenone results in increased expression of CES3 mRNA
CTD
PMID:22982537
NCBI chr19:37,070,705...37,079,411
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Clca1
chloride channel accessory 1
increases expression
ISO
beta-damascenone results in increased expression of CLCA1 mRNA
CTD
PMID:22982537
NCBI chr 2:250,897,980...250,923,711
Ensembl chr 2:250,897,969...250,923,744
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Clca2
chloride channel accessory 2
increases expression
ISO
beta-damascenone results in increased expression of CLCA2 mRNA
CTD
PMID:22982537
NCBI chr 2:250,954,423...250,981,544
Ensembl chr 2:250,954,397...250,981,623
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Cyp17a1
cytochrome P450, family 17, subfamily a, polypeptide 1
increases expression
ISO
beta-damascenone results in increased expression of CYP17A1 mRNA
CTD
PMID:22982537
NCBI chr 1:266,422,127...266,429,947
Ensembl chr 1:266,422,132...266,428,239
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Fcgbp
Fc fragment of IgG binding protein
increases expression
ISO
beta-damascenone results in increased expression of FCGBP mRNA
CTD
PMID:22982537
NCBI chr 1:85,003,280...85,046,840
Ensembl chr 1:85,003,280...85,046,840
G
Flg
filaggrin
increases expression
ISO
beta-damascenone results in increased expression of FLG mRNA; beta-damascenone results in increased expression of FLG protein
CTD
PMID:22982537
NCBI chr 2:193,565,401...193,574,297
G
Hrnr
hornerin
increases expression
ISO
beta-damascenone results in increased expression of HRNR mRNA
CTD
PMID:22982537
NCBI chr 2:193,626,283...193,639,848
Ensembl chr 2:193,627,243...193,634,181
G
Il20ra
interleukin 20 receptor subunit alpha
increases expression
ISO
beta-damascenone results in increased expression of IL20RA mRNA
CTD
PMID:22982537
NCBI chr 1:15,180,328...15,222,785
Ensembl chr 1:15,180,328...15,222,785
G
Krt1
keratin 1
increases expression
ISO
beta-damascenone results in increased expression of KRT1 mRNA
CTD
PMID:22982537
NCBI chr 7:143,448,318...143,453,544
Ensembl chr 7:143,448,318...143,453,544
G
Krt10
keratin 10
increases expression
ISO
beta-damascenone results in increased expression of KRT10 mRNA
CTD
PMID:22982537
NCBI chr10:87,296,445...87,301,307
Ensembl chr10:87,296,451...87,300,736
G
Lce1c
late cornified envelope 1C
increases expression
ISO
beta-damascenone results in increased expression of LCE1C mRNA
CTD
PMID:22982537
G
Lce1d
late cornified envelope 1D
increases expression
ISO
beta-damascenone results in increased expression of LCE1D mRNA
CTD
PMID:22982537
G
Lce1f
late cornified envelope 1F
increases expression
ISO
beta-damascenone results in increased expression of LCE1F mRNA
CTD
PMID:22982537
NCBI chr 2:192,990,607...192,992,193
Ensembl chr 2:192,990,831...192,991,199
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Lce1l
late cornified envelope 1L
increases expression
ISO
beta-damascenone results in increased expression of LCE1B mRNA
CTD
PMID:22982537
NCBI chr 2:193,164,403...193,165,736
Ensembl chr 2:193,164,403...193,165,736
G
Lipm
lipase, family member M
increases expression
ISO
beta-damascenone results in increased expression of LIPM mRNA
CTD
PMID:22982537
NCBI chr 1:252,409,232...252,428,567
Ensembl chr 1:252,409,268...252,428,774
G
LOC100909600
PI-PLC X domain-containing protein 1-like
increases expression
ISO
beta-damascenone results in increased expression of PLCXD1 mRNA
CTD
PMID:22982537
NCBI chr12:52,674,837...52,678,047
G
Loricrin
loricrin cornified envelope precursor protein
increases expression
ISO
beta-damascenone results in increased expression of LOR mRNA
CTD
PMID:22982537
NCBI chr 2:191,984,455...191,990,713
Ensembl chr 2:191,984,773...191,986,170
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Otop3
otopetrin 3
increases expression
ISO
beta-damascenone results in increased expression of OTOP3 mRNA
CTD
PMID:22982537
NCBI chr10:103,887,045...103,898,331
Ensembl chr10:103,891,369...103,898,331
G
Pla2g4f
phospholipase A2, group IVF
increases expression
ISO
beta-damascenone results in increased expression of PLA2G4F mRNA
CTD
PMID:22982537
NCBI chr 3:112,068,617...112,083,978
Ensembl chr 3:112,072,330...112,084,144
G
Sdr16c5
short chain dehydrogenase/reductase family 16C, member 5
increases expression
ISO
beta-damascenone results in increased expression of SDR16C5 mRNA
CTD
PMID:22982537
NCBI chr 5:16,904,926...16,930,111
Ensembl chr 5:16,904,926...16,930,075
G
Susd2
sushi domain containing 2
increases expression
ISO
beta-damascenone results in increased expression of SUSD2 mRNA
CTD
PMID:22982537
NCBI chr20:13,965,098...13,972,547
Ensembl chr20:13,965,121...13,972,547
G
Tmprss4
transmembrane serine protease 4
increases expression
ISO
beta-damascenone results in increased expression of TMPRSS4 mRNA
CTD
PMID:22982537
NCBI chr 8:49,469,804...49,503,304
Ensembl chr 8:49,469,503...49,502,647
G
Bax
BCL2 associated X, apoptosis regulator
increases expression
ISO
beta-ionone results in increased expression of BAX protein
CTD
PMID:31506784
NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
G
Bcl2
BCL2, apoptosis regulator
decreases expression
ISO
beta-ionone results in decreased expression of BCL2 protein
CTD
PMID:23100158 PMID:31506784
NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
G
Casp3
caspase 3
multiple interactions increases cleavage increases expression
ISO
[alpha-Tocopherol co-treated with beta-ionone] results in increased activity of CASP3 protein beta-ionone results in increased cleavage of CASP3 protein beta-ionone results in increased expression of CASP3 protein modified form
CTD
PMID:17618090 PMID:23100158 PMID:31506784
NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
G
Ccnd1
cyclin D1
decreases expression
ISO
beta-ionone results in decreased expression of CCND1 protein
CTD
PMID:15450939 PMID:31506784
NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
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Cdk2
cyclin dependent kinase 2
decreases expression
ISO
beta-ionone results in decreased expression of CDK2 protein
CTD
PMID:15450939
NCBI chr 7:3,124,953...3,132,533
Ensembl chr 7:3,124,954...3,132,457
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Cdk4
cyclin-dependent kinase 4
decreases expression
ISO
beta-ionone results in decreased expression of CDK4 protein
CTD
PMID:15450939 PMID:31506784
NCBI chr 7:70,345,971...70,352,689
Ensembl chr 7:70,349,863...70,352,418
G
Cryz
crystallin zeta
increases activity
ISO
beta-ionone results in increased activity of CRYZ protein
CTD
PMID:31506784
NCBI chr 2:260,884,315...260,911,827
Ensembl chr 2:260,884,337...260,911,792
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Hmgcr
3-hydroxy-3-methylglutaryl-CoA reductase
multiple interactions
EXP
beta-ionone promotes the reaction [[Diethylnitrosamine co-treated with 2-Acetylaminofluorene] results in increased expression of HMGCR mRNA]
CTD
PMID:20435455
NCBI chr 2:27,480,224...27,500,654
Ensembl chr 2:27,480,226...27,500,654
G
Lmnb1
lamin B1
decreases farnesylation
ISO
beta-ionone results in decreased farnesylation of LMNB1 protein
CTD
PMID:10203554
NCBI chr18:51,785,111...51,822,264
Ensembl chr18:51,785,111...51,822,264
G
Mapk1
mitogen activated protein kinase 1
increases phosphorylation multiple interactions
ISO
beta-ionone results in increased phosphorylation of MAPK1 protein beta-ionone inhibits the reaction [Lipopolysaccharides results in increased expression of MAPK1 protein modified form]
CTD
PMID:23268108 PMID:27226631
NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
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Mapk3
mitogen activated protein kinase 3
multiple interactions increases phosphorylation
ISO
beta-ionone inhibits the reaction [Lipopolysaccharides results in increased expression of MAPK3 protein modified form] beta-ionone results in increased phosphorylation of MAPK3 protein
CTD
PMID:23268108 PMID:27226631
NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
G
Nfkb1
nuclear factor kappa B subunit 1
multiple interactions
ISO
beta-ionone inhibits the reaction [Lipopolysaccharides affects the localization of NFKB1 protein]
CTD
PMID:23268108
NCBI chr 2:240,773,520...240,890,053
Ensembl chr 2:240,773,456...240,866,689
G
Nos2
nitric oxide synthase 2
multiple interactions
ISO
beta-ionone inhibits the reaction [Lipopolysaccharides results in increased expression of NOS2 mRNA]; beta-ionone inhibits the reaction [Lipopolysaccharides results in increased expression of NOS2 protein]
CTD
PMID:23268108
NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190
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Olr59
olfactory receptor 59
multiple interactions
ISO
beta-ionone binds to and results in increased activity of OR51E2 protein
CTD
PMID:27226631
NCBI chr 1:167,906,030...167,940,688
Ensembl chr 1:167,906,061...167,911,961
G
Ptgs2
prostaglandin-endoperoxide synthase 2
multiple interactions
ISO
beta-ionone inhibits the reaction [Lipopolysaccharides results in increased expression of PTGS2 mRNA]; beta-ionone inhibits the reaction [Lipopolysaccharides results in increased expression of PTGS2 protein] beta-ionone inhibits the reaction [Tetradecanoylphorbol Acetate results in increased expression of PTGS2 protein]
CTD
PMID:23268108 PMID:31506784
NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
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Rela
RELA proto-oncogene, NF-kB subunit
multiple interactions
ISO
beta-ionone inhibits the reaction [Lipopolysaccharides affects the localization of RELA protein]
CTD
PMID:23268108
NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
G
Tnf
tumor necrosis factor
multiple interactions
ISO
beta-ionone inhibits the reaction [Lipopolysaccharides results in increased expression of TNF mRNA]; beta-ionone inhibits the reaction [Lipopolysaccharides results in increased secretion of TNF protein]
CTD
PMID:23268108
NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
G
Tyr
tyrosinase
increases expression
ISO
beta-ionone results in increased expression of TYR mRNA; beta-ionone results in increased expression of TYR protein
CTD
PMID:27226631
NCBI chr 1:151,012,598...151,106,802
Ensembl chr 1:151,012,598...151,106,802
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all
Path 1
CHEBI ontology
19853
chemical entity
19853
atom
19851
nonmetal atom
19733
carbon atom
19639
organic molecular entity
19639
isoprenoid
10277
apo carotenoid
121
10'-apo-beta-carotenal
0
13-apo-beta-carotenone
0
2,6-dimethyldeca-2,4,6,8-tetraenedial
0
4,4'-diapolycopenedial
0
4,9-dimethyldodeca-2,4,6,8,10-pentaenedial
0
4-methylocta-2,4,6-trienedial
0
6'-apo-beta-carotenal
0
9-cis-10'-apo-beta-carotenal
0
apo carotenoid C25 terpenoid +
0
apo carotenoid C35 terpenoid +
0
apo carotenoid diterpenoid +
0
apo carotenoid monoterpenoid +
44
apo carotenoid sesquiterpenoid +
1
apo carotenoid triterpenoid +
77
bixin dialdehyde
0
citranaxanthin
0
rosafluine
0
Path 2
CHEBI ontology
19853
subatomic particle
19851
composite particle
19851
hadron
19851
baryon
19851
nucleon
19851
atomic nucleus
19851
atom
19851
main group element atom
19744
main group molecular entity
19744
p-block molecular entity
19744
carbon group molecular entity
19650
organic molecular entity
19639
lipid
17214
isoprenoid
10277
apo carotenoid
121
10'-apo-beta-carotenal
0
13-apo-beta-carotenone
0
2,6-dimethyldeca-2,4,6,8-tetraenedial
0
4,4'-diapolycopenedial
0
4,9-dimethyldodeca-2,4,6,8,10-pentaenedial
0
4-methylocta-2,4,6-trienedial
0
6'-apo-beta-carotenal
0
9-cis-10'-apo-beta-carotenal
0
apo carotenoid C25 terpenoid +
0
apo carotenoid C35 terpenoid +
0
apo carotenoid diterpenoid +
0
apo carotenoid monoterpenoid +
44
apo carotenoid sesquiterpenoid +
1
apo carotenoid triterpenoid +
77
bixin dialdehyde
0
citranaxanthin
0
rosafluine
0