CHEBI ONTOLOGY - ANNOTATIONS
The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/ . The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/ ). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term: 8'-apo-beta,psi-caroten-8'-al
Accession: CHEBI:53154
browse the term
Definition: An apo carotenoid triterpenoid compound arising from oxidative degradation of the beta,beta-carotene skeleton at the 8'-position.
Synonyms: related_synonym: 8'-Apo-beta-caroten-8'-al; 8'-Apo-beta-carotenal; 8'Apo-beta,psi-carotenal; Apocarotenal; C Orange 16; C.I. Food Orange 6; Food orange 6; Formula=C30H40O; InChI=1S/C30H40O/c1-24(13-8-9-14-25(2)16-11-18-27(4)23-31)15-10-17-26(3)20-21-29-28(5)19-12-22-30(29,6)7/h8-11,13-18,20-21,23H,12,19,22H2,1-7H3/b9-8+,15-10+,16-11+,21-20+,24-13+,25-14+,26-17+,27-18+; InChIKey=DFMMVLFMMAQXHZ-DOKBYWHISA-N; SMILES=[H]C(=O)C(\\C)=C\\C=C\\C(C)=C\\C=C\\C=C(C)\\C=C\\C=C(C)\\C=C\\C1=C(C)CCCC1(C)C; all-trans-beta-Apo-8'-carotenal; beta-Apo-8'-carotenal (C30); beta-Apocarotenal; beta-apo-Carotenal
xref: Beilstein:2064131; CAS:1107-26-2
xref_mesh: MESH:C004984
xref: PMID:10917914; PMID:15686550
G
Acadm
acyl-CoA dehydrogenase medium chain
increases expression
ISO
apocarotenal results in increased expression of ACADM mRNA
CTD
PMID:17034753
NCBI chr 2:242,858,865...242,883,036
Ensembl chr 2:242,858,865...242,883,147
G
Adh5
alcohol dehydrogenase 5 (class III), chi polypeptide
increases expression
ISO
apocarotenal results in increased expression of ADH5 mRNA
CTD
PMID:17034753
NCBI chr 2:226,975,184...226,987,591
Ensembl chr 2:226,947,466...226,987,591
G
Aldh1b1
aldehyde dehydrogenase 1 family, member B1
decreases expression
ISO
apocarotenal results in decreased expression of ALDH1B1 mRNA
CTD
PMID:17034753
NCBI chr 5:60,063,370...60,068,378
Ensembl chr 5:60,063,225...60,068,378
G
Aldh3b1
aldehyde dehydrogenase 3 family, member B1
decreases expression
ISO
apocarotenal results in decreased expression of ALDH3B1 mRNA
CTD
PMID:17034753
NCBI chr 1:201,145,309...201,162,675
Ensembl chr 1:201,145,309...201,163,921
G
Aldh4a1
aldehyde dehydrogenase 4 family, member A1
decreases expression
ISO
apocarotenal results in decreased expression of ALDH4A1 mRNA
CTD
PMID:17034753
NCBI chr 5:151,880,002...151,905,491
Ensembl chr 5:151,830,701...151,925,345
G
Ank2
ankyrin 2
increases expression
ISO
apocarotenal results in increased expression of ANK2 mRNA
CTD
PMID:17034753
NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923
G
Ank3
ankyrin 3
increases expression
ISO
apocarotenal results in increased expression of ANK3 mRNA
CTD
PMID:17034753
NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300
G
Asah1
N-acylsphingosine amidohydrolase 1
increases expression
ISO
apocarotenal results in increased expression of ASAH1 mRNA
CTD
PMID:17034753
NCBI chr16:50,966,404...50,997,827
Ensembl chr16:50,966,229...51,008,233
G
Asb1
ankyrin repeat and SOCS box-containing 1
increases expression
ISO
apocarotenal results in increased expression of ASB1 mRNA
CTD
PMID:17034753
NCBI chr 9:92,120,332...92,140,790
Ensembl chr 9:92,120,306...92,136,376
G
Asb9
ankyrin repeat and SOCS box-containing 9
increases expression
ISO
apocarotenal results in increased expression of ASB9 mRNA
CTD
PMID:17034753
NCBI chr X:29,956,576...30,001,436
Ensembl chr X:29,956,576...30,001,105
G
Bax
BCL2 associated X, apoptosis regulator
decreases expression
ISO
apocarotenal results in decreased expression of BAX mRNA
CTD
PMID:17034753
NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
G
Bco2
beta-carotene oxygenase 2
multiple interactions
ISO
[BCO2 protein results in increased metabolism of beta Carotene] which results in increased chemical synthesis of apocarotenal; [BCO2 protein results in increased metabolism of Cryptoxanthins] which results in increased chemical synthesis of apocarotenal; [BCO2 protein results in increased metabolism of Lutein] which results in increased chemical synthesis of apocarotenal metabolite; [BCO2 protein results in increased metabolism of Zeaxanthins] which results in increased chemical synthesis of apocarotenal metabolite
CTD
PMID:21106934
NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467
G
Casp8ap2
caspase 8 associated protein 2
increases expression
ISO
apocarotenal results in increased expression of CASP8AP2 mRNA
CTD
PMID:17034753
NCBI chr 5:47,014,501...47,052,276
Ensembl chr 5:47,014,667...47,052,275
G
Cdh1
cadherin 1
increases expression
ISO
apocarotenal results in increased expression of CDH1 mRNA
CTD
PMID:17034753
NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
G
Cldn10
claudin 10
increases expression
ISO
apocarotenal results in increased expression of CLDN10 mRNA
CTD
PMID:17034753
NCBI chr15:95,862,785...95,954,526
Ensembl chr15:95,862,760...95,954,526
G
Cldn18
claudin 18
increases expression
ISO
apocarotenal results in increased expression of CLDN18 mRNA
CTD
PMID:17034753
NCBI chr 8:100,246,499...100,265,797
Ensembl chr 8:100,247,633...100,273,351
G
Col1a1
collagen type I alpha 1 chain
decreases expression
ISO
apocarotenal results in decreased expression of COL1A1 mRNA
CTD
PMID:17034753
NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
G
Col4a1
collagen type IV alpha 1 chain
decreases expression
ISO
apocarotenal results in decreased expression of COL4A1 mRNA
CTD
PMID:17034753
NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
G
Col4a2
collagen type IV alpha 2 chain
decreases expression
ISO
apocarotenal results in decreased expression of COL4A2 mRNA
CTD
PMID:17034753
NCBI chr16:78,047,591...78,183,360
Ensembl chr16:78,047,602...78,183,839
G
Crabp2
cellular retinoic acid binding protein 2
decreases expression
ISO
apocarotenal results in decreased expression of CRABP2 mRNA
CTD
PMID:17034753
NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379
G
Ctsb
cathepsin B
decreases expression
ISO
apocarotenal results in decreased expression of CTSB mRNA
CTD
PMID:17034753
NCBI chr15:37,389,636...37,410,508
Ensembl chr15:37,389,629...37,410,500
G
Cxcl12
C-X-C motif chemokine ligand 12
increases expression
ISO
apocarotenal results in increased expression of CXCL12 mRNA
CTD
PMID:17034753
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
G
Cxcl6
C-X-C motif chemokine ligand 6
increases expression
ISO
apocarotenal results in increased expression of CXCL6 mRNA
CTD
PMID:17034753
NCBI chr14:17,310,790...17,312,250
Ensembl chr14:17,310,426...17,313,093
G
Cxcl9
C-X-C motif chemokine ligand 9
increases expression
ISO
apocarotenal results in increased expression of CXCL9 mRNA
CTD
PMID:17034753
NCBI chr14:15,722,868...15,727,779
Ensembl chr14:15,722,908...15,728,435
G
Cxcr4
C-X-C motif chemokine receptor 4
increases expression
ISO
apocarotenal results in increased expression of CXCR4 mRNA
CTD
PMID:17034753
NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
G
Dlx2
distal-less homeobox 2
increases expression
ISO
apocarotenal results in increased expression of DLX2 mRNA
CTD
PMID:17034753
NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597
G
Dlx4
distal-less homeobox 4
increases expression
ISO
apocarotenal results in increased expression of DLX4 mRNA
CTD
PMID:17034753
NCBI chr10:80,085,037...80,090,434
Ensembl chr10:80,085,465...80,090,456
G
Ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit
decreases expression
ISO
apocarotenal results in decreased expression of ERCC2 mRNA
CTD
PMID:17034753
NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
G
Ets1
ETS proto-oncogene 1, transcription factor
decreases expression
ISO
apocarotenal results in decreased expression of ETS1 mRNA
CTD
PMID:17034753
NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
G
Fas
Fas cell surface death receptor
increases expression
ISO
apocarotenal results in increased expression of FAS mRNA
CTD
PMID:17034753
NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
G
Fasn
fatty acid synthase
decreases expression
ISO
apocarotenal results in decreased expression of FASN mRNA
CTD
PMID:17034753
NCBI chr10:106,072,093...106,090,259
Ensembl chr10:106,072,091...106,090,261
G
Gata6
GATA binding protein 6
increases expression
ISO
apocarotenal results in increased expression of GATA6 mRNA
CTD
PMID:17034753
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
G
Gbp1
guanylate binding protein 1
increases expression
ISO
apocarotenal results in increased expression of GBP1 mRNA
CTD
PMID:17034753
NCBI chr 2:231,398,136...231,432,773
Ensembl chr 2:231,398,163...231,432,131 Ensembl chr 2:231,398,163...231,432,131
G
Gstk1
glutathione S-transferase kappa 1
decreases expression
ISO
apocarotenal results in decreased expression of GSTK1 mRNA
CTD
PMID:17034753
NCBI chr 4:71,118,979...71,123,298
Ensembl chr 4:71,118,896...71,123,292
G
Gstm2
glutathione S-transferase mu 2
decreases expression
ISO
apocarotenal results in decreased expression of GSTM2 mRNA
CTD
PMID:17034753
NCBI chr 2:195,624,015...195,628,774
Ensembl chr 2:195,544,426...195,628,961
G
Gstm4
glutathione S-transferase mu 4
decreases expression
ISO
apocarotenal results in decreased expression of GSTM4 mRNA
CTD
PMID:17034753
NCBI chr 2:195,667,940...195,685,315
Ensembl chr 2:195,680,004...195,685,323
G
Gstm5l
glutathione S-transferase, mu 5-like
increases expression
ISO
apocarotenal results in increased expression of GSTM5 mRNA
CTD
PMID:17034753
NCBI chr 2:195,544,424...195,549,895
Ensembl chr 2:195,544,426...195,628,961
G
Gstz1
glutathione S-transferase zeta 1
decreases expression
ISO
apocarotenal results in decreased expression of GSTZ1 mRNA
CTD
PMID:17034753
NCBI chr 6:106,794,594...106,805,284
Ensembl chr 6:106,794,074...106,805,284
G
Hoxa7
homeobox A7
increases expression
ISO
apocarotenal results in increased expression of HOXA7 mRNA
CTD
PMID:17034753
NCBI chr 4:81,315,730...81,317,629
Ensembl chr 4:81,314,625...81,317,659
G
Hoxb6
homeo box B6
increases expression
ISO
apocarotenal results in increased expression of HOXB6 mRNA
CTD
PMID:17034753
NCBI chr10:81,258,726...81,267,458
Ensembl chr10:81,265,056...81,267,449
G
Hoxc10
homeo box C10
increases expression
ISO
apocarotenal results in increased expression of HOXC10 mRNA
CTD
PMID:17034753
NCBI chr 7:134,103,741...134,108,966
Ensembl chr 7:134,103,643...134,108,966
G
Irf8
interferon regulatory factor 8
increases expression
ISO
apocarotenal results in increased expression of IRF8 mRNA
CTD
PMID:17034753
NCBI chr19:48,790,581...48,812,363
Ensembl chr19:48,790,588...48,811,829
G
Irx4
iroquois homeobox 4
decreases expression
ISO
apocarotenal results in decreased expression of IRX4 mRNA
CTD
PMID:17034753
NCBI chr 1:30,030,561...30,039,549
Ensembl chr 1:30,030,561...30,039,549
G
Itgb4
integrin subunit beta 4
decreases expression
ISO
apocarotenal results in decreased expression of ITGB4 mRNA
CTD
PMID:17034753
NCBI chr10:101,206,657...101,243,012
Ensembl chr10:101,206,665...101,243,012
G
Ivl
involucrin
increases expression
ISO
apocarotenal results in increased expression of IVL mRNA
CTD
PMID:17034753
NCBI chr 2:178,146,694...178,160,807
Ensembl chr 2:178,147,061...178,149,100
G
Krt17
keratin 17
decreases expression
ISO
apocarotenal results in decreased expression of KRT17 mRNA
CTD
PMID:17034753
NCBI chr10:85,178,673...85,183,392
Ensembl chr10:85,178,675...85,183,392
G
Krt2
keratin 2
increases expression
ISO
apocarotenal results in increased expression of KRT2 mRNA
CTD
PMID:17034753
NCBI chr 7:132,940,879...132,948,031
Ensembl chr 7:132,940,862...132,947,963
G
Krt7
keratin 7
affects expression
ISO
apocarotenal affects the expression of KRT7 mRNA
CTD
PMID:17034753
NCBI chr 7:132,528,881...132,545,052
Ensembl chr 7:132,528,895...132,545,052
G
Lhx3
LIM homeobox 3
increases expression
ISO
apocarotenal results in increased expression of LHX3 mRNA
CTD
PMID:17034753
NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
G
LOC100912356
interferon alpha-1-like
increases expression
ISO
apocarotenal results in increased expression of IFNA5 mRNA
CTD
PMID:17034753
NCBI chr 5:103,227,820...103,230,500
G
Mcl1
MCL1 apoptosis regulator, BCL2 family member
affects expression
ISO
apocarotenal affects the expression of MCL1 mRNA
CTD
PMID:17034753
NCBI chr 2:183,219,137...183,235,676
Ensembl chr 2:183,219,220...183,222,303
G
Meis2
Meis homeobox 2
increases expression
ISO
apocarotenal results in increased expression of MEIS2 mRNA
CTD
PMID:17034753
NCBI chr 3:102,742,904...102,944,833
Ensembl chr 3:102,742,900...102,949,696
G
Meox1
mesenchyme homeobox 1
increases expression
ISO
apocarotenal results in increased expression of MEOX1 mRNA
CTD
PMID:17034753
NCBI chr10:86,818,450...86,837,563
Ensembl chr10:86,818,478...86,837,660
G
Mnx1
motor neuron and pancreas homeobox 1
increases expression
ISO
apocarotenal results in increased expression of MNX1 mRNA
CTD
PMID:17034753
NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465
G
Msh5
mutS homolog 5
increases expression
ISO
apocarotenal results in increased expression of MSH5 mRNA
CTD
PMID:17034753
NCBI chr20:3,773,867...3,793,337
Ensembl chr20:3,776,942...3,793,336
G
Muc5ac
mucin 5AC, oligomeric mucus/gel-forming
increases expression
ISO
apocarotenal results in increased expression of MUC5AC mRNA
CTD
PMID:17034753
NCBI chr 1:196,864,336...196,896,475
Ensembl chr 1:196,864,336...196,896,475
G
Nos1
nitric oxide synthase 1
increases expression
ISO
apocarotenal results in increased expression of NOS1 mRNA
CTD
PMID:17034753
NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
G
Olr1
oxidized low density lipoprotein receptor 1
increases expression
ISO
apocarotenal results in increased expression of OLR1 mRNA
CTD
PMID:17034753
NCBI chr 4:162,926,436...162,949,057
Ensembl chr 4:162,926,439...162,948,523
G
Pcdhgc3
protocadherin gamma subfamily C, 3
increases expression
ISO
apocarotenal results in increased expression of PCDHGC3 mRNA
CTD
PMID:17034753
NCBI chr18:29,633,016...29,667,865
Ensembl chr18:29,493,954...29,667,868
G
Plscr1
phospholipid scramblase 1
increases expression
ISO
apocarotenal results in increased expression of PLSCR1 mRNA
CTD
PMID:17034753
NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692
G
Plscr3
phospholipid scramblase 3
increases expression
ISO
apocarotenal results in increased expression of PLSCR3 mRNA
CTD
PMID:17034753
NCBI chr10:54,566,556...54,573,240
Ensembl chr10:54,566,873...54,578,709
G
Plscr4
phospholipid scramblase 4
increases expression
ISO
apocarotenal results in increased expression of PLSCR4 mRNA
CTD
PMID:17034753
NCBI chr 8:92,987,290...93,026,056
Ensembl chr 8:92,987,381...93,026,049
G
Rad51ap1
RAD51 associated protein 1
increases expression
ISO
apocarotenal results in increased expression of RAD51AP1 mRNA
CTD
PMID:17034753
NCBI chr 4:159,759,454...159,772,473
Ensembl chr 4:159,759,459...159,772,524
G
Rad51d
RAD51 paralog D
increases expression
ISO
apocarotenal results in increased expression of RAD51D mRNA
CTD
PMID:17034753
NCBI chr10:67,805,720...67,824,452
Ensembl chr10:67,740,712...67,824,434
G
Rara
retinoic acid receptor, alpha
decreases expression
ISO
apocarotenal results in decreased expression of RARA mRNA
CTD
PMID:17034753
NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
G
Rarb
retinoic acid receptor, beta
increases expression
ISO
apocarotenal results in increased expression of RARB mRNA
CTD
PMID:17034753
NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288
G
Rarres1
retinoic acid receptor responder 1
increases expression
ISO
apocarotenal results in increased expression of RARRES1 mRNA
CTD
PMID:17034753
NCBI chr 2:151,749,715...151,783,975
Ensembl chr 2:151,749,715...151,783,978
G
Six6
SIX homeobox 6
increases expression
ISO
apocarotenal results in increased expression of SIX6 mRNA
CTD
PMID:17034753
NCBI chr 6:91,634,568...91,639,548
Ensembl chr 6:91,634,568...91,639,548
G
Sod1
superoxide dismutase 1
decreases expression
ISO
apocarotenal results in decreased expression of SOD1 mRNA
CTD
PMID:17034753
NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
G
Sptlc2
serine palmitoyltransferase, long chain base subunit 2
affects expression
ISO
apocarotenal affects the expression of SPTLC2 mRNA
CTD
PMID:17034753
NCBI chr 6:106,948,682...107,031,532
Ensembl chr 6:106,950,949...107,031,542
G
Srebf1
sterol regulatory element binding transcription factor 1
increases expression
ISO
apocarotenal results in increased expression of SREBF1 mRNA
CTD
PMID:17034753
NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
G
Tgm4
transglutaminase 4
increases expression
ISO
apocarotenal results in increased expression of TGM4 mRNA
CTD
PMID:17034753
NCBI chr 8:122,689,429...122,726,463
Ensembl chr 8:122,689,429...122,726,463
G
Tnfrsf9
TNF receptor superfamily member 9
increases expression
ISO
apocarotenal results in increased expression of TNFRSF9 mRNA
CTD
PMID:17034753
NCBI chr 5:161,381,662...161,408,003
Ensembl chr 5:161,381,662...161,408,000
G
Tnfsf10
TNF superfamily member 10
increases expression
ISO
apocarotenal results in increased expression of TNFSF10 mRNA
CTD
PMID:17034753
NCBI chr 2:110,199,835...110,227,239
Ensembl chr 2:110,207,916...110,225,135
G
Txndc9
thioredoxin domain containing 9
increases expression
ISO
apocarotenal results in increased expression of TXNDC9 mRNA
CTD
PMID:17034753
NCBI chr 9:40,211,818...40,221,953
Ensembl chr 9:40,211,412...40,384,279 Ensembl chr 9:40,211,412...40,384,279
G
Xrcc3
X-ray repair cross complementing 3
increases expression
ISO
apocarotenal results in increased expression of XRCC3 mRNA
CTD
PMID:17034753
NCBI chr 6:130,863,405...130,873,765
Ensembl chr 6:130,863,959...130,872,444
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all