Send us a Message

Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   


The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at The data is made available under the Creative Commons License (CC BY 3.0, For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

go back to main search page
Accession:CHEBI:53013 term browser browse the term
Definition:A cytidine 3'-phosphate compound with a monophosphate group at the 3'-position.
Synonyms:related_synonym: 3'-Cytidylic acid;   Cytidine 3'-monophosphate;   Cytidine 3'-phosphate;   Formula=C9H14N3O8P;   InChI=1S/C9H14N3O8P/c10-5-1-2-12(9(15)11-5)8-6(14)7(4(3-13)19-8)20-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H2,10,11,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1;   InChIKey=UOOOPKANIPLQPU-XVFCMESISA-N;   SMILES=Nc1ccn([C@@H]2O[C@H](CO)[C@@H](OP(O)(O)=O)[C@H]2O)c(=O)n1
 alt_id: CHEBI:1335;   CHEBI:23517;   CHEBI:28929;   CHEBI:41345;   CHEBI:41615
 xref: Beilstein:46971;   CAS:63-37-6;   CAS:84-52-6;   DrugBank:DB01961;   KEGG:C05822
 xref_mesh: MESH:D003568
 xref: MetaCyc:CPD-3711;   PDBeChem:C3P;   PMID:20602460;   PMID:5256413;   Reaxys:46971
 cyclic_relationship: is_conjugate_acid_of CHEBI:60875

show annotations for term's descendants           Sort by:
3'-CMP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase multiple interactions ISO [delta-hexachlorocyclohexane results in decreased activity of CDIPT protein] which results in decreased abundance of Cytidine Monophosphate; [Inositol promotes the reaction [CDIPT protein results in increased metabolism of Cytidine Diphosphate Diglycerides]] which results in increased abundance of Cytidine Monophosphate CTD PMID:2579070 NCBI chr 1:181,583,098...181,587,409
Ensembl chr 1:181,583,141...181,587,408
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19821
    role 19769
      biological role 19769
        biochemical role 19389
          metabolite 19364
            3'-CMP 1
              cytidylyl-(3'->5')-guanosine 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19821
    subatomic particle 19819
      composite particle 19819
        hadron 19819
          baryon 19819
            nucleon 19819
              atomic nucleus 19819
                atom 19819
                  main group element atom 19716
                    p-block element atom 19716
                      chalcogen 19469
                        oxygen atom 19445
                          oxygen molecular entity 19445
                            hydroxides 19180
                              oxoacid 18498
                                pnictogen oxoacid 10685
                                  phosphorus oxoacid 9666
                                    phosphoric acids 8466
                                      phosphoric acid 8466
                                        phosphoric acid derivative 8172
                                          phosphate 8172
                                            organic phosphate 8171
                                              carbohydrate phosphate 1734
                                                phospho sugar 1659
                                                  aldose phosphate 1657
                                                    aldopentose phosphate 1651
                                                      ribose phosphate 1646
                                                        ribonucleotide 1607
                                                          ribonucleoside 3'-phosphate 1
                                                            ribonucleoside 3'-monophosphate 1
                                                              pyrimidine ribonucleoside 3'-monophosphate 1
                                                                3'-CMP 1
                                                                  cytidylyl-(3'->5')-guanosine 0
paths to the root