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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:Genipin
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Accession:CHEBI:5298 term browser browse the term
Definition:An iridoid monoterpenoid that has formula C11H14O5.
Synonyms:related_synonym: Formula=C11H14O5;   InChI=1S/C11H14O5/c1-15-10(13)8-5-16-11(14)9-6(4-12)2-3-7(8)9/h2,5,7,9,11-12,14H,3-4H2,1H3/t7-,9-,11-/m1/s1;   InChIKey=AZKVWQKMDGGDSV-BCMRRPTOSA-N;   SMILES=COC(=O)C1=CO[C@@H](O)[C@H]2[C@@H]1CC=C2CO
 xref: AGR:IND606358367;   AGR:IND606366595;   CAS:6902-77-8;   KEGG:C09780;   KNApSAcK:C00000321
 xref_mesh: MESH:C007834
 xref: PMID:31351462;   PMID:31466050;   PMID:31571857;   PMID:31605673;   PMID:31614580;   PMID:31615330;   PMID:31646411;   PMID:31665713;   PMID:31671698;   PMID:31682429;   PMID:31706565;   PMID:31720526;   PMID:31724991;   PPR:PPR99870



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Genipin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 multiple interactions ISO genipin inhibits the reaction [Oxygen deficiency results in increased phosphorylation of AKT1 protein] CTD PMID:29630948 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Angptl4 angiopoietin-like 4 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of ANGPTL4 mRNA] CTD PMID:22687549 NCBI chr 7:14,550,288...14,557,797
Ensembl chr 7:14,550,311...14,556,519
JBrowse link
G Bax BCL2 associated X, apoptosis regulator increases expression ISO genipin results in increased expression of BAX mRNA CTD PMID:22245672 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Bcas2 BCAS2, pre-mRNA processing factor multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of BCAS2 mRNA] CTD PMID:22687549 NCBI chr 2:190,692,503...190,700,386
Ensembl chr 2:190,692,461...190,700,389
JBrowse link
G Bcl2 BCL2, apoptosis regulator decreases expression ISO genipin results in decreased expression of BCL2 mRNA CTD PMID:22245672 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Birc3 baculoviral IAP repeat-containing 3 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of BIRC3 mRNA] CTD PMID:22687549 NCBI chr 8:5,000,844...5,028,470
Ensembl chr 8:5,000,845...5,015,802
JBrowse link
G Bst2 bone marrow stromal cell antigen 2 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of BST2 mRNA] CTD PMID:22687549 NCBI chr16:18,217,404...18,220,979
Ensembl chr16:18,217,407...18,220,979
JBrowse link
G Ca9 carbonic anhydrase 9 multiple interactions ISO genipin inhibits the reaction [Oxygen deficiency results in increased expression of CA9 mRNA] CTD PMID:29630948 NCBI chr 5:57,763,234...57,769,838
Ensembl chr 5:57,763,206...57,769,838
JBrowse link
G Calhm6 calcium homeostasis modulator family member 6 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of CALHM6 mRNA] CTD PMID:22687549 NCBI chr20:26,095,591...26,097,336
Ensembl chr20:26,095,592...26,097,278
JBrowse link
G Casp3 caspase 3 increases activity ISO genipin results in increased activity of CASP3 protein CTD PMID:22245672 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Ccr7 C-C motif chemokine receptor 7 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of CCR7 mRNA] CTD PMID:22687549 NCBI chr10:84,098,193...84,108,309
Ensembl chr10:84,097,381...84,108,309
JBrowse link
G Ccrl2 C-C motif chemokine receptor like 2 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of CCRL2 mRNA] CTD PMID:22687549 NCBI chr 8:111,034,279...111,036,914
Ensembl chr 8:111,034,279...111,036,664
JBrowse link
G Cd14 CD14 molecule multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of CD14 mRNA] CTD PMID:22687549 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cd40 CD40 molecule multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of CD40 mRNA] CTD PMID:22687549 NCBI chr 3:153,790,372...153,805,279
Ensembl chr 3:153,790,449...153,805,534
JBrowse link
G Cebpd CCAAT/enhancer binding protein delta multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of CEBPD mRNA] CTD PMID:22687549 NCBI chr11:84,764,670...84,765,808
Ensembl chr11:84,764,565...84,765,829
JBrowse link
G Csf3 colony stimulating factor 3 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of CSF3 mRNA] CTD PMID:22687549 NCBI chr10:83,660,787...83,664,569
Ensembl chr10:83,661,207...83,663,603
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of CXCL10 mRNA] CTD PMID:22687549 NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975
JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of CXCL5 mRNA] CTD PMID:22687549 NCBI chr14:17,310,089...17,312,303
Ensembl chr14:17,310,426...17,313,093
JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of CXCL9 mRNA] CTD PMID:22687549 NCBI chr14:15,722,868...15,727,779
Ensembl chr14:15,722,908...15,728,435
JBrowse link
G Dnm1l dynamin 1-like multiple interactions ISO genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in increased expression of DNM1L protein] CTD PMID:28477916 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha multiple interactions ISO genipin affects the reaction [[Oxygen deficiency co-treated with benzyloxycarbonylleucyl-leucyl-leucine aldehyde] affects the expression of HIF1A protein]; genipin affects the reaction [[Oxygen deficiency co-treated with Cycloheximide] affects the expression of HIF1A protein]; genipin inhibits the reaction [Oxygen deficiency results in increased expression of HIF1A protein] CTD PMID:29630948 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hmox1 heme oxygenase 1 increases expression ISO genipin results in increased expression of HMOX1 protein CTD PMID:24413982 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Ifi35 interferon-induced protein 35 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of IFI35 mRNA] CTD PMID:22687549 NCBI chr10:86,381,023...86,389,279
Ensembl chr10:86,381,010...86,389,952
JBrowse link
G Ifi44 interferon-induced protein 44 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of IFI44 mRNA] CTD PMID:22687549 NCBI chr 2:240,626,058...240,643,879
Ensembl chr 2:240,626,066...240,643,844
JBrowse link
G Ifih1 interferon induced with helicase C domain 1 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of IFIH1 mRNA] CTD PMID:22687549 NCBI chr 3:47,228,980...47,275,403
Ensembl chr 3:47,227,364...47,275,456
JBrowse link
G Ifit3 interferon-induced protein with tetratricopeptide repeats 3 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of IFIT3 mRNA] CTD PMID:22687549 NCBI chr 1:232,114,166...232,119,311
Ensembl chr 1:232,114,166...232,119,307
JBrowse link
G Il1b interleukin 1 beta multiple interactions ISO genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in increased expression of IL1B protein]; genipin inhibits the reaction [Lipopolysaccharides results in increased expression of IL1B protein] CTD PMID:22687549 PMID:28477916 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Il1rn interleukin 1 receptor antagonist multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of IL1RN mRNA] CTD PMID:22687549 NCBI chr 3:7,111,567...7,127,451
Ensembl chr 3:7,111,550...7,127,445
JBrowse link
G Il6 interleukin 6 multiple interactions ISO genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in increased expression of IL6 protein] CTD PMID:28477916 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Isg15 ISG15 ubiquitin-like modifier multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of ISG15 mRNA] CTD PMID:22687549 NCBI chr 5:166,784,148...166,785,435
Ensembl chr 5:166,784,148...166,785,435
JBrowse link
G Klf2 Kruppel-like factor 2 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of KLF2 mRNA] CTD PMID:22687549 NCBI chr16:17,521,773...17,523,723
Ensembl chr16:17,514,552...17,523,944
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in decreased expression of LAPTM5 mRNA] CTD PMID:22687549 NCBI chr 5:143,087,759...143,109,807
Ensembl chr 5:143,087,759...143,109,807
JBrowse link
G Map3k8 mitogen-activated protein kinase kinase kinase 8 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of MAP3K8 mRNA] CTD PMID:22687549 NCBI chr17:53,382,908...53,403,216
Ensembl chr17:53,383,131...53,403,216
JBrowse link
G Mapk1 mitogen activated protein kinase 1 multiple interactions
decreases phosphorylation
ISO genipin inhibits the reaction [Oxygen deficiency results in increased phosphorylation of MAPK1 protein]
genipin results in decreased phosphorylation of MAPK1 protein
CTD PMID:29630948 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
JBrowse link
G Mapk3 mitogen activated protein kinase 3 decreases phosphorylation
multiple interactions
ISO genipin results in decreased phosphorylation of MAPK3 protein
genipin inhibits the reaction [Oxygen deficiency results in increased phosphorylation of MAPK3 protein]
CTD PMID:29630948 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Megf11 multiple EGF-like-domains 11 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of MEGF11 mRNA] CTD PMID:22687549 NCBI chr 8:64,892,312...65,218,984
Ensembl chr 8:64,892,387...65,216,061
JBrowse link
G Mfn2 mitofusin 2 multiple interactions ISO genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in decreased expression of MFN2 protein] CTD PMID:28477916 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Mmp13 matrix metallopeptidase 13 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of MMP13 mRNA] CTD PMID:22687549 NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239
JBrowse link
G Mmp2 matrix metallopeptidase 2 multiple interactions ISO genipin inhibits the reaction [Oxygen deficiency results in increased expression of MMP2 protein] CTD PMID:29630948 NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
JBrowse link
G Mmp9 matrix metallopeptidase 9 multiple interactions ISO genipin inhibits the reaction [Oxygen deficiency results in increased expression of MMP9 protein] CTD PMID:29630948 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Mx1 MX dynamin like GTPase 1 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of MX1 mRNA] CTD PMID:22687549 NCBI chr11:36,799,659...36,825,209
Ensembl chr11:36,799,660...36,823,507
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of MYD88 mRNA] CTD PMID:22687549 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 multiple interactions ISO [Lipopolysaccharides co-treated with genipin] results in increased activity of NFE2L2 protein CTD PMID:30114225 PMID:30203046 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 increases expression ISO genipin results in increased expression of NQO1 protein CTD PMID:24413982 NCBI chr19:35,295,633...35,310,528
Ensembl chr19:35,295,573...35,310,557
JBrowse link
G Nrarp Notch-regulated ankyrin repeat protein multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in decreased expression of NRARP mRNA] CTD PMID:22687549 NCBI chr 3:7,992,582...7,995,136
Ensembl chr 3:7,992,552...7,995,133
JBrowse link
G Nrf1 nuclear respiratory factor 1 multiple interactions ISO genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in decreased expression of NRF1 protein] CTD PMID:28477916 NCBI chr 4:58,664,932...58,772,328
Ensembl chr 4:58,664,957...58,825,328
JBrowse link
G Oas2 2'-5' oligoadenylate synthetase 2 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of OAS2 mRNA] CTD PMID:22687549 NCBI chr12:35,802,824...35,830,778
Ensembl chr12:35,806,759...35,829,371
JBrowse link
G Oasl 2'-5'-oligoadenylate synthetase-like multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of OASL mRNA] CTD PMID:22687549 NCBI chr12:41,682,900...41,695,641
Ensembl chr12:41,682,900...41,695,641
JBrowse link
G Osmr oncostatin M receptor multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of OSMR mRNA] CTD PMID:22687549 NCBI chr 2:55,907,119...55,961,373
Ensembl chr 2:55,907,132...55,961,262
JBrowse link
G Pde4b phosphodiesterase 4B multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of PDE4B mRNA] CTD PMID:22687549 NCBI chr 5:116,799,827...117,367,707
Ensembl chr 5:116,799,971...117,367,696
JBrowse link
G Phf11 PHD finger protein 11 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of PHF11D mRNA] CTD PMID:22687549 NCBI chr15:33,390,290...33,414,647
Ensembl chr15:33,390,292...33,413,009
JBrowse link
G Pink1 PTEN induced kinase 1 multiple interactions ISO genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in increased expression of PINK1 protein] CTD PMID:28477916 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Plau plasminogen activator, urokinase multiple interactions ISO genipin inhibits the reaction [Oxygen deficiency results in increased expression of PLAU protein] CTD PMID:29630948 NCBI chr15:3,456,230...3,462,732
Ensembl chr15:3,456,232...3,462,775
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha multiple interactions ISO genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in decreased expression of PPARGC1A protein]; sirtinol inhibits the reaction [genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in decreased expression of PPARGC1A protein]] CTD PMID:28477916 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase multiple interactions ISO genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in decreased expression of PRKN protein]; sirtinol inhibits the reaction [genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in decreased expression of PRKN protein]] CTD PMID:28477916 NCBI chr 1:48,688,651...49,882,520 JBrowse link
G Psmb8 proteasome 20S subunit beta 8 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of PSMB8 mRNA] CTD PMID:22687549 NCBI chr20:4,652,159...4,655,122
Ensembl chr20:4,652,159...4,655,283
JBrowse link
G Rnase3 ribonuclease A family member 3 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of EAR1 mRNA] CTD PMID:22687549 NCBI chr15:24,511,894...24,512,764
Ensembl chr15:24,511,891...24,512,790
JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of RSAD2 mRNA] CTD PMID:22687549 NCBI chr 6:43,046,514...43,059,737
Ensembl chr 6:43,047,658...43,059,699
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of SAMHD1 mRNA] CTD PMID:22687549 NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386
JBrowse link
G Sbk1 SH3 domain binding kinase 1 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in decreased expression of SBK1 mRNA] CTD PMID:22687549 NCBI chr 1:180,807,092...180,851,910
Ensembl chr 1:180,807,099...180,851,885
JBrowse link
G Sirt1 sirtuin 1 multiple interactions ISO genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in decreased expression of SIRT1 protein]; sirtinol inhibits the reaction [genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in decreased expression of SIRT1 protein]] CTD PMID:28477916 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Slc10a6 solute carrier family 10 member 6 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of SLC10A6 mRNA] CTD PMID:22687549 NCBI chr14:6,080,716...6,102,037
Ensembl chr14:6,080,717...6,103,037
JBrowse link
G Slc16a11 solute carrier family 16, member 11 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of SLC16A11 mRNA] CTD PMID:22687549 NCBI chr10:54,929,129...54,933,021
Ensembl chr10:54,927,725...54,942,915
JBrowse link
G Slc2a1 solute carrier family 2 member 1 multiple interactions ISO genipin inhibits the reaction [Oxygen deficiency results in increased expression of SLC2A1 mRNA] CTD PMID:29630948 NCBI chr 5:132,717,196...132,745,416
Ensembl chr 5:132,717,196...132,745,416
JBrowse link
G Snrk SNF related kinase multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in decreased expression of SNRK mRNA] CTD PMID:22687549 NCBI chr 8:121,779,704...121,833,949
Ensembl chr 8:121,793,302...121,832,323
JBrowse link
G Sqstm1 sequestosome 1 multiple interactions ISO genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in increased expression of SQSTM1 protein] CTD PMID:28477916 NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of TAP2 mRNA] CTD PMID:22687549 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
JBrowse link
G Tek TEK receptor tyrosine kinase multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in decreased expression of TEK mRNA] CTD PMID:22687549 NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804
JBrowse link
G Tfam transcription factor A, mitochondrial multiple interactions ISO genipin inhibits the reaction [[Blood Glucose deficiency co-treated with Oxygen deficiency] results in decreased expression of TFAM protein] CTD PMID:28477916 NCBI chr20:17,356,243...17,368,293
Ensembl chr20:17,356,197...17,368,292
JBrowse link
G Tnf tumor necrosis factor multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of TNF protein] CTD PMID:22687549 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Tor3a torsin family 3, member A multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of TOR3A mRNA] CTD PMID:22687549 NCBI chr13:68,769,893...68,798,738
Ensembl chr13:68,769,605...68,798,475
JBrowse link
G Trex1 three prime repair exonuclease 1 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of TREX1 mRNA] CTD PMID:22687549 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
JBrowse link
G Ubd ubiquitin D multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of UBD mRNA] CTD PMID:22687549 NCBI chr20:1,385,487...1,387,438
Ensembl chr20:1,385,864...1,408,639
JBrowse link
G Usp18 ubiquitin specific peptidase 18 multiple interactions ISO genipin inhibits the reaction [Lipopolysaccharides results in increased expression of USP18 mRNA] CTD PMID:22687549 NCBI chr 4:154,471,634...154,499,154
Ensembl chr 4:154,471,592...154,499,144
JBrowse link
G Vegfa vascular endothelial growth factor A multiple interactions
decreases expression
ISO genipin inhibits the reaction [Oxygen deficiency results in increased expression of VEGFA mRNA]; genipin inhibits the reaction [Oxygen deficiency results in increased secretion of VEGFA protein]
genipin results in decreased expression of VEGFA mRNA
CTD PMID:29630948 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19800
    role 19751
      application 19498
        anti-inflammatory agent 15841
          Genipin 75
Path 2
Term Annotations click to browse term
  CHEBI ontology 19800
    subatomic particle 19799
      composite particle 19799
        hadron 19799
          baryon 19799
            nucleon 19799
              atomic nucleus 19799
                atom 19799
                  main group element atom 19698
                    main group molecular entity 19698
                      s-block molecular entity 19479
                        hydrogen molecular entity 19471
                          hydrides 18834
                            organic hydride 18348
                              organic fundamental parent 18348
                                hydrocarbon 18059
                                  terpene 12725
                                    monoterpene 2868
                                      monoterpenoid 1224
                                        iridoid monoterpenoid 101
                                          Genipin 75
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