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ONTOLOGY REPORT - ANNOTATIONS


Term:rose bengal(2-)
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Accession:CHEBI:52904 term browser browse the term
Definition:The anionic form of a fluorescent dye derived from a polyhalogenated fluorescin.
Synonyms:exact_synonym: 2,3,4,5-tetrachloro-6-(2,4,5,7-tetraiodo-6-oxido-3-oxo-3H-xanthen-9-yl)benzoate
 related_synonym: Formula=C20H2Cl4I4O5;   InChI=1S/C20H4Cl4I4O5/c21-10-8(9(20(31)32)11(22)13(24)12(10)23)7-3-1-5(25)16(29)14(27)18(3)33-19-4(7)2-6(26)17(30)15(19)28/h1-2,29H,(H,31,32)/p-2;   InChIKey=VDNLFJGJEQUWRB-UHFFFAOYSA-L;   SMILES=[O-]C(=O)c1c(Cl)c(Cl)c(Cl)c(Cl)c1-c1c2cc(I)c([O-])c(I)c2oc2c(I)c(=O)c(I)cc12;   rose bengal anion;   rose bengal dianion
 xref: Beilstein:1445395 "Beilstein"
 xref_mesh: MESH:D012395
 cyclic_relationship: is_conjugate_base_of CHEBI:87202


show annotations for term's descendants       view all columns           Sort by:
 
rose bengal term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:6480464
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 JBrowse link 8 58,744,849 58,772,408 RGD:6480464
G Gsta2 glutathione S-transferase alpha 2 JBrowse link 8 85,640,081 85,645,621 RGD:6480464
G Iyd iodotyrosine deiodinase JBrowse link 1 40,086,513 40,100,966 RGD:6480464
G Kcnh2 potassium voltage-gated channel subfamily H member 2 JBrowse link 4 7,355,066 7,387,282 RGD:6480464
G Klkb1 kallikrein B1 JBrowse link 16 50,151,127 50,175,407 RGD:6480464
G Ugt1a6 UDP glucuronosyltransferase family 1 member A6 JBrowse link 9 95,241,609 95,302,822 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19754
    role 19701
      application 19353
        dye 1279
          xanthene dye 76
            rose bengal(2-) 7
              rose bengal 7
Path 2
Term Annotations click to browse term
  CHEBI ontology 19754
    subatomic particle 19752
      composite particle 19752
        hadron 19752
          baryon 19752
            nucleon 19752
              atomic nucleus 19752
                atom 19752
                  main group element atom 19637
                    p-block element atom 19637
                      carbon group element atom 19528
                        carbon atom 19517
                          organic molecular entity 19517
                            organic molecule 19436
                              organic cyclic compound 19199
                                organic heterocyclic compound 18276
                                  oxacycle 17025
                                    dibenzopyran 226
                                      xanthenes 223
                                        xanthene dye 76
                                          rose bengal(2-) 7
                                            rose bengal 7
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.