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ONTOLOGY REPORT - ANNOTATIONS


Term:auramine O
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Accession:CHEBI:51876 term browser browse the term
Definition:A hydrochloride obtained by combining 4,4'-carbonimidoylbis(N,N-dimethylaniline) with one molar equivalent of hydrogen chloride. A fluorescent stain for demonstrating acid fast organisms in a method similar to the Ziehl Neelsen. It also can be used to make a fluorescent Schiff reagent.
Synonyms:exact_synonym: 4,4'-carbonimidoylbis(N,N-dimethylaniline) hydrochloride;   bis[4-(dimethylamino)phenyl]methaniminium chloride
 related_synonym: (Tetramethyldiamino)diphenylketoimine hydrochloride;   1,1-Bis(p-dimethylaminophenyl)methylenimine hydrochloride;   4,4'-(Imidocarbonyl)bis(N,N-dimethylamine), monohydrochloride;   4,4'-Bis(dimethylamino)-benzhydrylidenimine hydrochloride;   4:4'-Bis(dimethylamino)benzophenone-imine hydrochloride;   Auramin;   Auramine Yellow;   Basic yellow 2;   C.I. 41000;   C.I. Basic Yellow 2;   C.I. Basic Yellow 2, monohydrochloride;   Formula=C17H21N3.HCl;   Formula=C17H22ClN3;   InChI=1S/C17H21N3.ClH/c1-19(2)15-9-5-13(6-10-15)17(18)14-7-11-16(12-8-14)20(3)4;/h5-12,18H,1-4H3;1H;   InChIKey=KSCQDDRPFHTIRL-UHFFFAOYSA-N;   SMILES=Cl.CN(C)c1ccc(cc1)C(=N)c1ccc(cc1)N(C)C
 xref: Beilstein:4030061;   CAS:2465-27-2
 xref_mesh: MESH:D001576
 xref: PMID:25459504;   PMID:25712592;   PMID:25782178;   PMID:25898317;   Reaxys:4030061;   Wikipedia:Auramine_O


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auramine O term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 JBrowse link 1 238,222,689 238,264,381 RGD:6480464
G Ano6 anoctamin 6 JBrowse link 7 137,142,063 137,335,208 RGD:6480464
G Araf A-Raf proto-oncogene, serine/threonine kinase JBrowse link X 1,369,534 1,391,603 RGD:6480464
G Atp6ap2 ATPase H+ transporting accessory protein 2 JBrowse link X 11,137,889 11,164,854 RGD:6480464
G Ccdc22 coiled-coil domain containing 22 JBrowse link X 15,742,978 15,754,925 RGD:6480464
G Ccdc39 coiled-coil domain containing 39 JBrowse link 2 120,278,605 120,367,829 RGD:6480464
G Cd44 CD44 molecule (Indian blood group) JBrowse link 3 92,695,083 92,783,820 RGD:6480464
G Chtf18 chromosome transmission fidelity factor 18 JBrowse link 10 15,090,762 15,098,825 RGD:6480464
G Commd1 copper metabolism domain containing 1 JBrowse link 14 107,664,321 107,759,974 RGD:6480464
G Cops7b COP9 signalosome subunit 7B JBrowse link 9 93,607,199 93,633,064 RGD:6480464
G Cul3 cullin 3 JBrowse link 9 86,044,485 86,129,066 RGD:6480464
G Dynlt1 dynein light chain Tctex-type 1 JBrowse link 1 47,206,892 47,213,785 RGD:6480464
G Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 JBrowse link 5 156,343,663 156,564,037 RGD:6480464
G Fastkd2 FAST kinase domains 2 JBrowse link 9 70,448,386 70,471,420 RGD:6480464
G Hook3 hook microtubule-tethering protein 3 JBrowse link 16 70,710,347 70,818,789 RGD:6480464
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 JBrowse link 13 88,288,116 88,308,019 RGD:6480464
G Htt huntingtin JBrowse link 14 81,105,139 81,254,637 RGD:6480464
G Iqgap3 IQ motif containing GTPase activating protein 3 JBrowse link 2 187,447,477 187,489,630 RGD:6480464
G Kifap3 kinesin-associated protein 3 JBrowse link 13 82,072,497 82,217,256 RGD:6480464
G Map1lc3b microtubule-associated protein 1 light chain 3 beta JBrowse link 19 53,635,449 53,643,970 RGD:6480464
G Map2k4 mitogen activated protein kinase kinase 4 JBrowse link 10 52,196,121 52,301,887 RGD:6480464
G Mbd3 methyl-CpG binding domain protein 3 JBrowse link 7 12,179,046 12,186,251 RGD:6480464
G Noa1 nitric oxide associated 1 JBrowse link 14 33,107,868 33,124,172 RGD:6480464
G Nup62 nucleoporin 62 JBrowse link 1 100,811,140 100,827,119 RGD:6480464
G Plcg1 phospholipase C, gamma 1 JBrowse link 3 156,727,642 156,758,307 RGD:6480464
G Ppp4r1 protein phosphatase 4, regulatory subunit 1 JBrowse link 9 113,515,312 113,573,308 RGD:6480464
G Prim2 DNA primase subunit 2 JBrowse link 9 38,535,435 38,745,058 RGD:6480464
G Prom1 prominin 1 JBrowse link 14 71,532,321 71,637,400 RGD:6480464
G Prorp protein only RNase P catalytic subunit JBrowse link 6 76,079,880 76,171,298 RGD:6480464
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link 10 47,030,813 47,059,216 RGD:6480464
G Srsf11 serine and arginine rich splicing factor 11 JBrowse link 2 264,837,463 264,864,296 RGD:6480464
G Tbc1d15 TBC1 domain family, member 15 JBrowse link 7 58,164,190 58,219,804 RGD:6480464
G Tfam transcription factor A, mitochondrial JBrowse link 20 18,594,057 18,606,106 RGD:6480464
G Usp24 ubiquitin specific peptidase 24 JBrowse link 5 125,896,725 126,030,411 RGD:6480464
G Washc5 WASH complex subunit 5 JBrowse link 7 99,625,379 99,677,237 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19770
    role 19717
      application 19366
        dye 1284
          histological dye 143
            auramine O 35
Path 2
Term Annotations click to browse term
  CHEBI ontology 19770
    subatomic particle 19768
      composite particle 19768
        hadron 19768
          baryon 19768
            nucleon 19768
              atomic nucleus 19768
                atom 19768
                  main group element atom 19653
                    p-block element atom 19653
                      halogen 17913
                        chlorine atom 17680
                          chlorine molecular entity 17680
                            elemental chlorine 8381
                              monoatomic chlorine 8362
                                chloride 8362
                                  chloride salt 8362
                                    organic chloride salt 662
                                      hydrochloride 433
                                        auramine O 35
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.