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ONTOLOGY REPORT - ANNOTATIONS


Term:acridine orange
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Accession:CHEBI:51739 term browser browse the term
Definition:Fluorescent dye useful for cell cycle determination. It is cell-permeable, and interacts with DNA and RNA by intercalation or electrostatic attractions respectively.
Synonyms:exact_synonym: N,N,N',N'-tetramethylacridine-3,6-diamine hydrochloride
 related_synonym: 3,6-Bis(dimethylamino)acridine;   3,6-Bis(dimethylamino)acridine hydrochloride;   C.I. 46005;   Formula=C17H19N3.ClH;   Formula=C17H20ClN3;   InChI=1S/C17H19N3.ClH/c1-19(2)14-7-5-12-9-13-6-8-15(20(3)4)11-17(13)18-16(12)10-14;/h5-11H,1-4H3;1H;   InChIKey=VSTHNGLPHBTRMB-UHFFFAOYSA-N;   N3,N3,N6,N6-tetramethyl-3,6-Acridinediamine hydrochloride(1:1);   Rhoduline Orange;   SMILES=[H+].[Cl-].CN(C)c1ccc2cc3ccc(cc3nc2c1)N(C)C;   basic orange 14
 xref: Beilstein:3575587;   CAS:494-38-2;   CAS:65-61-2;   KEGG:C19315
 xref_mesh: MESH:D000165
 xref: Wikipedia:Acridine_orange


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acridine orange term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bax BCL2-associated X protein JBrowse link 7 45,461,695 45,466,903 RGD:6480464
G Gstp1 glutathione S-transferase, pi 1 JBrowse link 19 4,035,411 4,037,912 RGD:6480464
G Trp53 transformation related protein 53 JBrowse link 11 69,580,348 69,591,873 RGD:6480464

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Term Annotations click to browse term
  CHEBI ontology 21322
    role 21309
      application 20768
        dye 1282
          histological dye 146
            acridine orange 3
Path 2
Term Annotations click to browse term
  CHEBI ontology 21322
    subatomic particle 21318
      composite particle 21318
        hadron 21318
          baryon 21318
            nucleon 21318
              atomic nucleus 21318
                atom 21318
                  main group element atom 21193
                    p-block element atom 21193
                      carbon group element atom 20991
                        carbon atom 20881
                          organic molecular entity 20881
                            organic molecule 20763
                              organic cyclic compound 20250
                                organic heterocyclic compound 19058
                                  organic heteropolycyclic compound 18492
                                    organic heterotricyclic compound 15300
                                      dibenzopyridine 153
                                        acridines 119
                                          aminoacridines 17
                                            acridine orange cation 3
                                              acridine orange 3
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.