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ONTOLOGY REPORT - ANNOTATIONS


Term:acridine orange
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Accession:CHEBI:51739 term browser browse the term
Definition:Fluorescent dye useful for cell cycle determination. It is cell-permeable, and interacts with DNA and RNA by intercalation or electrostatic attractions respectively.
Synonyms:exact_synonym: N,N,N',N'-tetramethylacridine-3,6-diamine hydrochloride
 related_synonym: 3,6-Bis(dimethylamino)acridine;   3,6-Bis(dimethylamino)acridine hydrochloride;   C.I. 46005;   Formula=C17H19N3.ClH;   Formula=C17H20ClN3;   InChI=1S/C17H19N3.ClH/c1-19(2)14-7-5-12-9-13-6-8-15(20(3)4)11-17(13)18-16(12)10-14;/h5-11H,1-4H3;1H;   InChIKey=VSTHNGLPHBTRMB-UHFFFAOYSA-N;   N3,N3,N6,N6-tetramethyl-3,6-Acridinediamine hydrochloride(1:1);   Rhoduline Orange;   SMILES=[H+].[Cl-].CN(C)c1ccc2cc3ccc(cc3nc2c1)N(C)C;   basic orange 14
 xref: Beilstein:3575587;   CAS:494-38-2;   CAS:65-61-2;   KEGG:C19315
 xref_mesh: MESH:D000165
 xref: Wikipedia:Acridine_orange


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acridine orange term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BAX BCL2 associated X, apoptosis regulator JBrowse link 19 48,954,825 48,961,798 RGD:6480464
G GSTP1 glutathione S-transferase pi 1 JBrowse link 11 67,583,812 67,586,653 RGD:6480464
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 24141
    role 24034
      application 23445
        dye 1298
          histological dye 145
            acridine orange 3
Path 2
Term Annotations click to browse term
  CHEBI ontology 24141
    subatomic particle 24095
      composite particle 24095
        hadron 24095
          baryon 24095
            nucleon 24095
              atomic nucleus 24095
                atom 24095
                  main group element atom 23924
                    p-block element atom 23924
                      carbon group element atom 23656
                        carbon atom 23612
                          organic molecular entity 23612
                            organic molecule 23481
                              organic cyclic compound 22564
                                organic heterocyclic compound 21036
                                  organic heteropolycyclic compound 20005
                                    organic heterotricyclic compound 14976
                                      dibenzopyridine 153
                                        acridines 119
                                          aminoacridines 17
                                            acridine orange cation 3
                                              acridine orange 3
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.