Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:4,4-difluoro-4-bora-3a,4a-diaza-s-indacene
go back to main search page
Accession:CHEBI:51107 term browser browse the term
Definition:A BODIPY compound that has formula C9H7BF2N2.
Synonyms:exact_synonym: difluoro{2-[(2H-pyrrol-2-ylidene-kappaN)methyl]-1H-pyrrolato-kappaN}boron
 related_synonym: BODIPY;   Formula=C9H7BF2N2;   InChI=1S/C9H7BF2N2/c11-10(12)13-5-1-3-8(13)7-9-4-2-6-14(9)10/h1-7H;   InChIKey=GUHHEAYOTAJBPT-UHFFFAOYSA-N;   SMILES=F[B-]1(F)n2cccc2C=C2C=CC=[N+]12
 xref: Beilstein:8139995;   Gmelin:1746256
 xref_mesh: MESH:C095489


show annotations for term's descendants           Sort by:
 
4,4-difluoro-4-bora-3a,4a-diaza-s-indacene term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 affects transport ISO ABCB11 protein affects the transport of 4,4-difluoro-4-bora-3a,4a-diaza-s-indacene CTD PMID:12739759 NCBI chr 3:55,480,024...55,587,946
Ensembl chr 3:55,480,024...55,587,946
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19816
    chemical entity 19816
      atom 19814
        metalloid atom 12072
          boron atom 867
            boron molecular entity 867
              4-bora-3a,4a-diaza-s-indacene 1
                BODIPY compound 1
                  4,4-difluoro-4-bora-3a,4a-diaza-s-indacene 1
                    BODIPY 630/650-X 0
                    BODIPY 650/665-X 0
                    BODIPY FL 0
                    BODIPY FL-X 0
                    BODIPY R6G 0
                    BODIPY TMR-X 0
                    BODIPY TR methyl ester 0
                    BODIPY TR-X phallacidin 0
                    BODIPY-3823 0
                    calcein red-orange 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19816
    subatomic particle 19814
      composite particle 19814
        hadron 19814
          baryon 19814
            nucleon 19814
              atomic nucleus 19814
                atom 19814
                  main group element atom 19702
                    p-block element atom 19702
                      carbon group element atom 19608
                        carbon atom 19597
                          organic molecular entity 19597
                            organic molecule 19522
                              organic cyclic compound 19320
                                organic heterocyclic compound 18432
                                  organonitrogen heterocyclic compound 17485
                                    polypyrrole 609
                                      dipyrrole 1
                                        dipyrrins 1
                                          4-bora-3a,4a-diaza-s-indacene 1
                                            BODIPY compound 1
                                              4,4-difluoro-4-bora-3a,4a-diaza-s-indacene 1
                                                BODIPY 630/650-X 0
                                                BODIPY 650/665-X 0
                                                BODIPY FL 0
                                                BODIPY FL-X 0
                                                BODIPY R6G 0
                                                BODIPY TMR-X 0
                                                BODIPY TR methyl ester 0
                                                BODIPY TR-X phallacidin 0
                                                BODIPY-3823 0
                                                calcein red-orange 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.