CHEBI ONTOLOGY - ANNOTATIONS
The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/ . The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/ ). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term: fixative
Accession: CHEBI:50913
browse the term
Definition: Any compound used for the purpose of preserving biological tissues from decay in such a way as to allow for the preparation of thin, stained sections for subsequent histological study.
Synonyms: related_synonym: fixating agent; fixating agents; fixation agent
xref: Wikipedia:Fixation_(histology)
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Akr1c2
aldo-keto reductase family 1, member C2
increases expression
ISO
benzyl cinnamate results in increased expression of AKR1C2 mRNA
CTD
PMID:20491607
NCBI chr17:69,388,337...69,435,160
Ensembl chr17:69,388,335...69,404,341
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Cd86
CD86 molecule
increases expression
ISO
benzyl cinnamate results in increased expression of CD86 protein
CTD
PMID:29540657
NCBI chr11:67,060,305...67,117,990
Ensembl chr11:67,082,193...67,118,795
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Cyp1a1
cytochrome P450, family 1, subfamily a, polypeptide 1
increases expression
ISO
benzyl cinnamate results in increased expression of CYP1A1 mRNA
CTD
PMID:20491607
NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
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Maff
MAF bZIP transcription factor F
increases expression
ISO
benzyl cinnamate results in increased expression of MAFF mRNA
CTD
PMID:20491607
NCBI chr 7:120,580,743...120,592,095
Ensembl chr 7:120,580,743...120,592,095
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Maoa
monoamine oxidase A
decreases activity
ISO
benzyl cinnamate results in decreased activity of MAOA protein
CTD
PMID:27270453
NCBI chr X:6,554,698...6,620,722
Ensembl chr X:6,554,698...6,620,722
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Maob
monoamine oxidase B
decreases activity
ISO
benzyl cinnamate results in decreased activity of MAOB protein
CTD
PMID:27270453
NCBI chr X:6,430,694...6,533,520
Ensembl chr X:6,430,594...6,533,534
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Mt1
metallothionein 1
increases expression
ISO
benzyl cinnamate results in increased expression of MT1A mRNA
CTD
PMID:20491607
NCBI chr19:11,301,991...11,303,007
Ensembl chr17:78,793,336...78,793,724
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Mt2A
metallothionein 2A
increases expression
ISO
benzyl cinnamate results in increased expression of MT2A mRNA
CTD
PMID:20491607
NCBI chr19:11,307,966...11,308,740
Ensembl chr19:11,307,967...11,308,740
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Nqo1
NAD(P)H quinone dehydrogenase 1
increases expression
ISO
benzyl cinnamate results in increased expression of NQO1 mRNA
CTD
PMID:20491607
NCBI chr19:38,422,210...38,437,103
Ensembl chr19:38,422,164...38,437,180
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Txn1
thioredoxin 1
increases expression
ISO
benzyl cinnamate results in increased expression of TXN mRNA
CTD
PMID:20491607
NCBI chr 5:75,049,735...75,057,731
Ensembl chr 5:75,049,747...75,057,752
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Atf4
activating transcription factor 4
increases expression
ISO
Glutaral results in increased expression of ATF4 mRNA
CTD
PMID:28236482
NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
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Casp8
caspase 8
decreases expression
ISO
Glutaral results in decreased expression of CASP8 mRNA
CTD
PMID:28236482
NCBI chr 9:65,614,142...65,662,624
Ensembl chr 9:65,614,142...65,662,106
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Ccl4
C-C motif chemokine ligand 4
increases expression
ISO
Glutaral results in increased expression of CCL4 mRNA
CTD
PMID:20713136
NCBI chr10:70,870,926...70,886,357
Ensembl chr10:70,884,531...70,886,355
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Cd86
CD86 molecule
increases expression
ISO
Glutaral results in increased expression of CD86 protein
CTD
PMID:19665512
NCBI chr11:67,060,305...67,117,990
Ensembl chr11:67,082,193...67,118,795
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G6pd
glucose-6-phosphate dehydrogenase
decreases activity
ISO
Glutaral results in decreased activity of G6PD protein
CTD
PMID:19490936
NCBI chr X:156,274,800...156,293,935
Ensembl chr X:156,274,800...156,293,926
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Gja1
gap junction protein, alpha 1
decreases expression
EXP
Glutaral results in decreased expression of GJA1 protein
CTD
PMID:19932693
NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
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Gsr
glutathione-disulfide reductase
decreases activity multiple interactions
ISO
Glutaral results in decreased activity of GSR protein Idarubicin promotes the reaction [Glutaral results in decreased activity of GSR protein]
CTD
PMID:19490936
NCBI chr16:62,197,617...62,239,987
Ensembl chr16:62,197,617...62,241,361
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Il1r2
interleukin 1 receptor type 2
increases expression
ISO
Glutaral results in increased expression of IL1R2 mRNA
CTD
PMID:20713136
NCBI chr 9:46,840,646...46,881,241
Ensembl chr 9:46,840,992...46,881,264
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Il6
interleukin 6
affects expression
ISO
Glutaral affects the expression of IL6 mRNA
CTD
PMID:20200221
NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
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Pmaip1
phorbol-12-myristate-13-acetate-induced protein 1
increases expression
ISO
Glutaral results in increased expression of PMAIP1 mRNA
CTD
PMID:20713136
NCBI chr18:62,159,128...62,179,635
Ensembl chr18:62,174,670...62,181,102
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Tnf
tumor necrosis factor
affects expression increases expression
ISO
Glutaral affects the expression of TNF mRNA Glutaral results in increased expression of TNF mRNA
CTD
PMID:20200221 PMID:28236482
NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
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Tp53
tumor protein p53
decreases expression
ISO
Glutaral results in decreased expression of TP53 mRNA
CTD
PMID:28236482
NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
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Abcb11
ATP binding cassette subfamily B member 11
affects expression
EXP
Soybean Oil affects the expression of ABCB11 mRNA
CTD
PMID:15770074
NCBI chr 3:55,480,024...55,587,946
Ensembl chr 3:55,480,024...55,587,946
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Abcb1b
ATP-binding cassette, subfamily B (MDR/TAP), member 1B
affects expression
EXP
Soybean Oil affects the expression of ABCB1B mRNA
CTD
PMID:15770074
NCBI chr 4:22,225,123...22,307,577
Ensembl chr 4:22,133,521...22,425,515
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Abcb4
ATP binding cassette subfamily B member 4
affects expression
EXP
Soybean Oil affects the expression of ABCB4 mRNA
CTD
PMID:15770074
NCBI chr 4:22,133,984...22,192,687
Ensembl chr 4:22,133,521...22,425,515
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Abcc1
ATP binding cassette subfamily C member 1
affects expression
EXP
Soybean Oil affects the expression of ABCC1 mRNA
CTD
PMID:15770074
NCBI chr10:549,537...672,235
Ensembl chr10:549,883...672,196
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Abcc2
ATP binding cassette subfamily C member 2
affects expression
EXP
Soybean Oil affects the expression of ABCC2 mRNA
CTD
PMID:15770074
NCBI chr 1:263,554,426...263,612,556
Ensembl chr 1:263,554,453...263,613,252
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Abcc5
ATP binding cassette subfamily C member 5
affects expression
EXP
Soybean Oil affects the expression of ABCC5 mRNA
CTD
PMID:15770074
NCBI chr11:84,395,982...84,490,215
Ensembl chr11:84,396,033...84,490,211
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Abcc6
ATP binding cassette subfamily C member 6
affects expression
EXP
Soybean Oil affects the expression of ABCC6 mRNA
CTD
PMID:15770074
NCBI chr 1:101,954,786...102,013,252
Ensembl chr 1:101,959,540...102,013,243
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Acat1
acetyl-CoA acetyltransferase 1
decreases activity
EXP
Soybean Oil results in decreased activity of ACAT1 protein
CTD
PMID:12559476
NCBI chr 8:58,166,990...58,195,884
Ensembl chr 8:58,166,990...58,195,884
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Bcl2
BCL2, apoptosis regulator
increases expression
EXP
Soybean Oil results in increased expression of BCL2 protein
CTD
PMID:15309441
NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
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Cat
catalase
increases activity
EXP
Soybean Oil results in increased activity of CAT protein
CTD
PMID:12781854
NCBI chr 3:93,379,872...93,412,058
Ensembl chr 3:93,379,874...93,412,058
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Ccnd1
cyclin D1
increases expression
EXP
Soybean Oil results in increased expression of CCND1 mRNA
CTD
PMID:21088903
NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
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Cyp4a1
cytochrome P450, family 4, subfamily a, polypeptide 1
affects expression
EXP
Soybean Oil affects the expression of CYP4A1 mRNA
CTD
PMID:16079505
NCBI chr 5:134,492,734...134,507,158
Ensembl chr 5:134,492,756...134,507,154
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Cyp7a1
cytochrome P450 family 7 subfamily A member 1
increases activity
EXP
Soybean Oil results in increased activity of CYP7A1 protein
CTD
PMID:12559476
NCBI chr 5:19,358,734...19,368,431
Ensembl chr 5:19,358,734...19,368,431
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Gstp1
glutathione S-transferase pi 1
multiple interactions
EXP
Soybean Oil promotes the reaction [15-deoxy-delta(12,14)-prostaglandin J2 results in increased expression of GSTP1 mRNA]; Soybean Oil promotes the reaction [15-deoxy-delta(12,14)-prostaglandin J2 results in increased expression of GSTP1 protein]
CTD
PMID:11600134
NCBI chr 1:219,291,679...219,294,147
Ensembl chr 1:219,291,679...219,294,147
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Hmgcr
3-hydroxy-3-methylglutaryl-CoA reductase
increases activity
EXP
Soybean Oil results in increased activity of HMGCR protein
CTD
PMID:12559476
NCBI chr 2:27,480,224...27,500,654
Ensembl chr 2:27,480,226...27,500,654
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Il12b
interleukin 12B
decreases expression
ISO
Soybean Oil results in decreased expression of IL12B mRNA
CTD
PMID:10065739
NCBI chr10:30,034,447...30,048,774
Ensembl chr10:30,038,709...30,048,085
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Slc22a1
solute carrier family 22 member 1
affects expression
EXP
Soybean Oil affects the expression of SLC22A1 mRNA
CTD
PMID:15770074
NCBI chr 1:48,273,639...48,300,645
Ensembl chr 1:48,273,611...48,300,655
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Slc22a7
solute carrier family 22 member 7
affects expression
EXP
Soybean Oil affects the expression of SLC22A7 mRNA
CTD
PMID:15770074
NCBI chr 9:16,925,321...16,931,119
Ensembl chr 9:16,924,520...16,931,766
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