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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:CDP-2,3-bis-O-(geranylgeranyl)-sn-glycerol
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Accession:CHEBI:50726 term browser browse the term
Definition:A nucleotide conjugate consisting of CDP joined at the 1-position of 2,3-bis-O-(geranylgeranyl)-sn-glycerol via a diphosphate linkage.
Synonyms:exact_synonym: 5'-O-[{[{[(2S)-2,3-bis{[(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl]oxy}propyl]oxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]cytidine
 related_synonym: CDP-2,3-digeranylgeranyl sn-G-1-P;   Formula=C52H85N3O13P2;   InChI=1S/C52H85N3O13P2/c1-38(2)17-11-19-40(5)21-13-23-42(7)25-15-27-44(9)30-33-63-35-46(64-34-31-45(10)28-16-26-43(8)24-14-22-41(6)20-12-18-39(3)4)36-65-69(59,60)68-70(61,62)66-37-47-49(56)50(57)51(67-47)55-32-29-48(53)54-52(55)58/h17-18,21-22,25-26,29-32,46-47,49-51,56-57H,11-16,19-20,23-24,27-28,33-37H2,1-10H3,(H,59,60)(H,61,62)(H2,53,54,58)/b40-21+,41-22+,42-25+,43-26+,44-30+,45-31+/t46-,47+,49+,50+,51+/m0/s1;   InChIKey=DCAZOLWWPLSROK-DXHGDTBASA-N;   SMILES=CC(C)=CCC\\C(C)=C\\CC\\C(C)=C\\CC\\C(C)=C\\COC[C@@H](COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n1ccc(N)nc1=O)OC\\C=C(/C)CC\\C=C(/C)CC\\C=C(/C)CCC=C(C)C
 xref: KEGG:C18059
 cyclic_relationship: is_conjugate_acid_of CHEBI:58838


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Term Annotations click to browse term
  CHEBI ontology 19811
    chemical entity 19840
      atom 19809
        nonmetal atom 19747
          nitrogen atom 18962
            nitrogen molecular entity 18934
              nucleobase-containing molecular entity 5659
                nucleotide conjugate 20
                  CDP-2,3-bis-O-(geranylgeranyl)-sn-glycerol 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19811
    subatomic particle 19809
      composite particle 19809
        hadron 19840
          baryon 19809
            nucleon 19809
              atomic nucleus 19809
                atom 19809
                  main group element atom 19759
                    p-block element atom 19759
                      chalcogen 19515
                        oxygen atom 19520
                          oxygen molecular entity 19490
                            hydroxides 19300
                              oxoacid 18725
                                pnictogen oxoacid 13221
                                  phosphorus oxoacid 12413
                                    phosphoric acids 11427
                                      phosphoric acid 11417
                                        phosphoric acid derivative 11226
                                          phosphate 11225
                                            organic phosphate 11225
                                              carbohydrate phosphate 1855
                                                phospho sugar 1702
                                                  aldose phosphate 1699
                                                    aldopentose phosphate 1691
                                                      ribose phosphate 1684
                                                        ribonucleotide 1645
                                                          ribonucleoside 5'-phosphate 643
                                                            ribonucleoside 5'-diphosphate 114
                                                              pyrimidine ribonucleoside 5'-diphosphate 23
                                                                CDP 5
                                                                  CDP-2,3-bis-O-(geranylgeranyl)-sn-glycerol 0
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