Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:D-erythrose 4-phosphate
go back to main search page
Accession:CHEBI:48153 term browser browse the term
Definition:An erythrose phosphate that is D-erythrose carrying a phosphate group at position 4. It is an intermediate in the pentose phosphate pathway and Calvin cycle.
Synonyms:exact_synonym: (2R,3R)-2,3-dihydroxy-4-oxobutyl dihydrogen phosphate;   D-erythrose 4-(dihydrogen phosphate)
 related_synonym: 4-O-phosphono-D-erythrose;   ERYTHOSE-4-PHOSPHATE;   Formula=C4H9O7P;   InChI=1S/C4H9O7P/c5-1-3(6)4(7)2-11-12(8,9)10/h1,3-4,6-7H,2H2,(H2,8,9,10)/t3-,4+/m0/s1;   InChIKey=NGHMDNPXVRFFGS-IUYQGCFVSA-N;   SMILES=[H]C(=O)[C@H](O)[C@H](O)COP(O)(O)=O
 alt_id: CHEBI:12921;   CHEBI:4114;   CHEBI:42349
 xref: Beilstein:1710821;   CAS:585-18-2;   DrugBank:DB03937;   KEGG:C00279;   KNApSAcK:C00007472
 xref_mesh: MESH:C026959
 xref: PDBeChem:E4P;   Reaxys:1710821;   Wikipedia:Erythrose_4-phosphate
 cyclic_relationship: is_conjugate_acid_of CHEBI:16897


show annotations for term's descendants           Sort by:
 
D-erythrose 4-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 multiple interactions
increases abundance
ISO Triazines inhibits the reaction [IDH2 protein mutant form results in increased abundance of erythrose 4-phosphate] CTD PMID:27469509 NCBI chr 1:141,874,354...141,893,674
Ensembl chr 1:141,866,283...141,893,705
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19810
    role 19758
      biological role 19758
        biochemical role 19304
          metabolite 19285
            eukaryotic metabolite 18934
              plant metabolite 17422
                D-erythrose 1
                  D-erythrose 4-phosphate 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 19810
    subatomic particle 19808
      composite particle 19808
        hadron 19808
          baryon 19808
            nucleon 19808
              atomic nucleus 19808
                atom 19808
                  main group element atom 19696
                    p-block element atom 19696
                      chalcogen 19391
                        oxygen atom 19353
                          oxygen molecular entity 19353
                            hydroxides 19103
                              oxoacid 18235
                                pnictogen oxoacid 10181
                                  phosphorus oxoacid 9072
                                    phosphoric acids 7831
                                      phosphoric acid 7831
                                        phosphoric acid derivative 7511
                                          phosphate 7511
                                            organic phosphate 7510
                                              carbohydrate phosphate 1536
                                                phospho sugar 1462
                                                  aldose phosphate 1460
                                                    aldotetrose phosphate 1
                                                      erythrose phosphate 1
                                                        D-erythrose 4-phosphate 1
paths to the root