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ONTOLOGY REPORT - ANNOTATIONS


Term:epibatidine
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Accession:CHEBI:4803 term browser browse the term
Definition:An alkaloid that has formula C11H13ClN2.
Synonyms:related_synonym: (1R,2R,4S)-2-(6-chloropyridin-3-yl)-7-azabicyclo[2.2.1]heptane;   CMI-488;   Formula=C11H13ClN2;   InChI=1S/C11H13ClN2/c12-11-4-1-7(6-13-11)9-5-8-2-3-10(9)14-8/h1,4,6,8-10,14H,2-3,5H2/t8?,9-,10+/m1/s1;   InChIKey=NLPRAJRHRHZCQQ-XVBQNVSMSA-N;   SMILES=C12C[C@@]([C@@H](N1)CC2)(C=3C=NC(=CC3)Cl)[H]
 alt_id: CHEBI:47399
 xref: CAS:140111-52-0 "ChemIDplus";   CAS:140111-52-0 "KEGG COMPOUND";   DrugBank:DB07720;   KEGG:C11690;   KNApSAcK:C00028244
 xref_mesh: MESH:C082748
 xref: PDBeChem:EPJ;   PMID:16193063 "Europe PMC";   PMID:20337496 "Europe PMC";   PMID:21909087 "Europe PMC";   PMID:8112391 "Europe PMC";   Wikipedia:Epibatidine


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epibatidine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit JBrowse link 3 60,445,657 60,460,724 RGD:6480464
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit JBrowse link 15 42,808,897 42,825,179 RGD:6480464
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit JBrowse link 8 59,594,007 59,607,122 RGD:6480464
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit JBrowse link 3 176,533,182 176,547,965 RGD:6480464
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit JBrowse link 1 123,897,341 124,039,263 RGD:6480464
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit JBrowse link 2 189,088,570 189,096,785 RGD:6480464
G Chrnb4 cholinergic receptor nicotinic beta 4 subunit JBrowse link 8 59,610,489 59,629,073 RGD:6480464
G Chrnd cholinergic receptor nicotinic delta subunit JBrowse link 9 94,286,550 94,294,968 RGD:6480464
G Chrng cholinergic receptor nicotinic gamma subunit JBrowse link 9 94,302,218 94,308,591 RGD:6480464
G Lynx1 Ly6/neurotoxin 1 JBrowse link 7 115,982,877 115,988,121 RGD:6480464
G Lypd1 Ly6/Plaur domain containing 1 JBrowse link 13 42,219,884 42,263,024 RGD:6480464
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19669
    role 19613
      biological role 19611
        biochemical role 19138
          metabolite 19106
            alkaloid 5195
              epibatidine 12
Path 2
Term Annotations click to browse term
  CHEBI ontology 19669
    subatomic particle 19665
      composite particle 19665
        hadron 19665
          baryon 19665
            nucleon 19665
              atomic nucleus 19665
                atom 19665
                  main group element atom 19545
                    main group molecular entity 19545
                      p-block molecular entity 19545
                        carbon group molecular entity 19428
                          organic molecular entity 19420
                            heteroorganic entity 19003
                              organonitrogen compound 18076
                                alkaloid 5195
                                  epibatidine 12
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.