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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:AMP-PNP
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Accession:CHEBI:47785 term browser browse the term
Definition:An adenosine 5'-phosphate that has formula C10H17N6O12P3.
Synonyms:exact_synonym: 5'-O-(hydroxy{[hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl)adenosine
 related_synonym: AMPPNP;   Adenylyl imidodiphosphate;   Formula=C10H17N6O12P3;   InChI=1S/C10H17N6O12P3/c11-8-5-9(13-2-12-8)16(3-14-5)10-7(18)6(17)4(27-10)1-26-31(24,25)28-30(22,23)15-29(19,20)21/h2-4,6-7,10,17-18H,1H2,(H,24,25)(H2,11,12,13)(H4,15,19,20,21,22,23)/t4-,6-,7-,10-/m1/s1;   InChIKey=PVKSNHVPLWYQGJ-KQYNXXCUSA-N;   O(5')-(1,2-dihydroxy-2-phosphonoaminodiphosphoryl)adenosine;   SMILES=Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP(O)(=O)OP(O)(=O)NP(O)(O)=O)[C@@H](O)[C@H]1O;   adenyl-5'-yl imidodiphosphate;   gamma-Imino-ATP
 xref: Beilstein:1064472;   CAS:25612-73-1
 xref_mesh: MESH:D000266


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AMP-PNP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor multiple interactions EXP Adenylyl Imidodiphosphate affects the folding of [Tetrachlorodibenzodioxin binds to AHR protein] CTD PMID:1848756 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Cftr CF transmembrane conductance regulator affects activity ISO Adenylyl Imidodiphosphate affects the activity of CFTR protein CTD PMID:15657297 NCBI chr 4:42,693,263...42,860,679
Ensembl chr 4:42,692,836...42,860,676
JBrowse link
G Ptgdr prostaglandin D2 receptor multiple interactions ISO Adenylyl Imidodiphosphate inhibits the reaction [Prostaglandin D2 binds to PTGDR protein] CTD PMID:9579725 NCBI chr15:19,195,606...19,196,508 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19853
    role 19804
      biological role 19804
        pharmacological role 18855
          analgesic 13089
            adenosine 331
              adenosine phosphate 257
                adenosine 5'-phosphate 256
                  AMP-PNP 3
Path 2
Term Annotations click to browse term
  CHEBI ontology 19853
    subatomic particle 19851
      composite particle 19851
        hadron 19851
          baryon 19851
            nucleon 19851
              atomic nucleus 19851
                atom 19851
                  main group element atom 19744
                    p-block element atom 19744
                      chalcogen 19438
                        oxygen atom 19400
                          oxygen molecular entity 19400
                            hydroxides 19123
                              oxoacid 18256
                                pnictogen oxoacid 10291
                                  phosphorus oxoacid 9212
                                    phosphoric acids 7929
                                      phosphoric acid 7929
                                        phosphoric acid derivative 7611
                                          phosphate 7611
                                            organic phosphate 7610
                                              carbohydrate phosphate 1700
                                                phospho sugar 1627
                                                  aldose phosphate 1625
                                                    aldopentose phosphate 1619
                                                      ribose phosphate 1614
                                                        ribonucleotide 1575
                                                          purine ribonucleotide 1546
                                                            adenyl ribonucleotide 1250
                                                              adenosine phosphate 257
                                                                adenosine 5'-phosphate 256
                                                                  AMP-PNP 3
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