CHEBI ONTOLOGY - ANNOTATIONS
The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/ . The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/ ). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
G
Aaas
aladin WD repeat nucleoporin
increases expression
ISO
1,4-dioxane results in increased expression of AAAS mRNA
CTD
PMID:33693819
NCBI chr 7:133,464,315...133,483,961
Ensembl chr 7:133,464,315...133,483,961
G
Aox1
aldehyde oxidase 1
increases expression
ISO
1,4-dioxane results in increased expression of AOX1 mRNA
CTD
PMID:33693819
NCBI chr 9:59,579,621...59,658,772
Ensembl chr 9:59,579,649...59,658,770
G
Atp6v0d2
ATPase H+ transporting V0 subunit D2
decreases expression
ISO
1,4-dioxane results in decreased expression of ATP6V0D2 mRNA
CTD
PMID:33693819
NCBI chr 5:33,336,257...33,385,354
Ensembl chr 5:33,336,264...33,385,354
G
Btg2
BTG anti-proliferation factor 2
increases expression
ISO
1,4-dioxane results in increased expression of BTG2 mRNA
CTD
PMID:33693819
NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628
G
Ccnb1
cyclin B1
increases expression
ISO
1,4-dioxane results in increased expression of CCNB1 protein
CTD
PMID:20025956
NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172
G
Ccng1
cyclin G1
increases expression
ISO
1,4-dioxane results in increased expression of CCNG1 mRNA
CTD
PMID:33693819
NCBI chr10:25,176,231...25,182,604
Ensembl chr10:25,176,234...25,181,641
G
Cpq
carboxypeptidase Q
decreases expression
ISO
1,4-dioxane results in decreased expression of CPQ mRNA
CTD
PMID:33693819
NCBI chr 7:64,264,025...64,830,867
Ensembl chr 7:64,264,081...64,724,546
G
Cyp2b1
cytochrome P450, family 2, subfamily b, polypeptide 1
multiple interactions
EXP
1,4-dioxane results in increased expression of and results in increased activity of CYP2B1 protein
CTD
PMID:15490126
NCBI chr 1:81,518,387...81,544,999
Ensembl chr 1:81,518,408...81,542,052
G
Cyp2b2
cytochrome P450, family 2, subfamily b, polypeptide 2
multiple interactions
EXP
1,4-dioxane results in increased expression of and results in increased activity of CYP2B2 protein
CTD
PMID:15490126
NCBI chr 1:81,594,534...81,608,567
Ensembl chr 1:81,594,555...81,608,566
G
Cyp2e1
cytochrome P450, family 2, subfamily e, polypeptide 1
multiple interactions increases expression increases activity
EXP
1,4-dioxane results in increased expression of and results in increased activity of CYP2E1 protein 1,4-dioxane results in increased expression of CYP2E1 mRNA 1,4-dioxane results in increased activity of CYP2E1 protein
CTD
PMID:15490126
NCBI chr 1:195,840,330...195,850,728
Ensembl chr 1:195,840,058...195,864,023
G
Cyp2g1
cytochrome P450, family 2, subfamily g, polypeptide 1
decreases expression
ISO
1,4-dioxane results in decreased expression of CYP2G1 mRNA
CTD
PMID:33693819
NCBI chr 1:82,145,635...82,156,862
Ensembl chr 1:82,145,073...82,156,828
G
Ddias
DNA damage-induced apoptosis suppressor
increases expression
ISO
1,4-dioxane results in increased expression of DDIAS mRNA
CTD
PMID:33693819
NCBI chr 1:146,906,150...146,930,462
Ensembl chr 1:146,906,154...146,930,462
G
Dglucy
D-glutamate cyclase
increases expression
ISO
1,4-dioxane results in increased expression of DGLUCY mRNA
CTD
PMID:33693819
NCBI chr 6:120,055,480...120,130,910
Ensembl chr 6:120,055,460...120,130,910
G
Eda2r
ectodysplasin A2 receptor
increases expression
ISO
1,4-dioxane results in increased expression of EDA2R mRNA
CTD
PMID:33693819
NCBI chr X:62,224,763...62,269,344
Ensembl chr X:62,228,229...62,269,268
G
Egr1
early growth response 1
increases expression
ISO
1,4-dioxane results in increased expression of EGR1 mRNA
CTD
PMID:33693819
NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
G
Ephx1
epoxide hydrolase 1
increases expression
ISO
1,4-dioxane results in increased expression of EPHX1 mRNA
CTD
PMID:33693819
NCBI chr13:92,714,315...92,744,124
Ensembl chr13:92,714,315...92,790,235
G
Erbb4
erb-b2 receptor tyrosine kinase 4
decreases expression
ISO
1,4-dioxane results in decreased expression of ERBB4 mRNA
CTD
PMID:33693819
NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
G
Fitm1
fat storage-inducing transmembrane protein 1
increases expression
ISO
1,4-dioxane results in increased expression of FITM1 mRNA
CTD
PMID:33693819
NCBI chr15:29,064,746...29,066,015
Ensembl chr15:29,064,707...29,066,015
G
Fras1
Fraser extracellular matrix complex subunit 1
decreases expression
ISO
1,4-dioxane results in decreased expression of FRAS1 mRNA
CTD
PMID:33693819
NCBI chr14:12,791,407...13,200,862
Ensembl chr14:12,793,599...13,200,726
G
Gsta2
glutathione S-transferase alpha 2
increases expression
ISO
1,4-dioxane results in increased expression of GSTA1 mRNA
CTD
PMID:33693819
NCBI chr 8:79,184,535...79,196,827
Ensembl chr 8:79,184,322...79,196,798
G
Gstm1
glutathione S-transferase mu 1
increases expression
ISO
1,4-dioxane results in increased expression of GSTM1 mRNA
CTD
PMID:33693819
NCBI chr 2:195,649,845...195,655,402
Ensembl chr 2:195,649,845...195,655,411
G
Gstm2
glutathione S-transferase mu 2
increases expression
ISO
1,4-dioxane results in increased expression of GSTM2 mRNA
CTD
PMID:33693819
NCBI chr 2:195,624,015...195,628,774
Ensembl chr 2:195,544,426...195,628,961
G
Gstm5
glutathione S-transferase, mu 5
increases expression
ISO
1,4-dioxane results in increased expression of GSTM3 mRNA
CTD
PMID:33693819
NCBI chr 2:195,531,627...195,534,562
Ensembl chr 2:195,531,495...195,534,553
G
Gstp1
glutathione S-transferase pi 1
increases expression
ISO
1,4-dioxane results in increased expression of GSTP1 mRNA
CTD
PMID:33693819
NCBI chr 1:201,337,762...201,340,230
Ensembl chr 1:201,321,672...201,340,226
G
H2ax
H2A.X variant histone
increases expression
ISO
1,4-dioxane results in increased expression of H2AX protein
CTD
PMID:33693819
NCBI chr 8:44,671,927...44,673,257
Ensembl chr 8:44,671,786...44,673,239
G
Hells
helicase, lymphoid specific
increases expression
ISO
1,4-dioxane results in increased expression of HELLS protein
CTD
PMID:20025956
NCBI chr 1:236,701,704...236,748,239
Ensembl chr 1:236,701,758...236,746,844
G
Hes1
hes family bHLH transcription factor 1
increases expression
ISO
1,4-dioxane results in increased expression of HES1 mRNA
CTD
PMID:33693819
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hexb
hexosaminidase subunit beta
decreases expression
ISO
1,4-dioxane results in decreased expression of HEXB mRNA
CTD
PMID:33693819
NCBI chr 2:28,483,997...28,504,165
Ensembl chr 2:28,484,012...28,504,223
G
Id1
inhibitor of DNA binding 1
increases expression
ISO
1,4-dioxane results in increased expression of ID1 mRNA
CTD
PMID:33693819
NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
G
Il1rl1
interleukin 1 receptor-like 1
increases expression
ISO
1,4-dioxane results in increased expression of IL1RL1 protein
CTD
PMID:20025956
NCBI chr 9:42,661,694...42,727,266
Ensembl chr 9:42,697,192...42,727,256
G
Mcm3
minichromosome maintenance complex component 3
increases expression
ISO
1,4-dioxane results in increased expression of MCM3 protein
CTD
PMID:20025956
NCBI chr 9:23,219,169...23,237,314
Ensembl chr 9:23,219,169...23,237,314
G
Meg3
maternally expressed 3
decreases expression
ISO
1,4-dioxane results in decreased expression of MEG3 mRNA
CTD
PMID:33693819
NCBI chr 6:128,491,808...128,524,010
G
Mgmt
O-6-methylguanine-DNA methyltransferase
increases expression
EXP
1,4-dioxane results in increased expression of MGMT mRNA
CTD
PMID:22084566 PMID:30155721
NCBI chr 1:191,710,980...191,937,760
Ensembl chr 1:191,710,930...191,937,756
G
Naaladl2
N-acetylated alpha-linked acidic dipeptidase-like 2
decreases expression
ISO
1,4-dioxane results in decreased expression of NAALADL2 mRNA
CTD
PMID:33693819
NCBI chr 2:106,639,146...107,992,218
Ensembl chr 2:106,645,608...107,991,689
G
Ncmap
noncompact myelin associated protein
decreases expression
ISO
1,4-dioxane results in decreased expression of NCMAP mRNA
CTD
PMID:33693819
NCBI chr 5:147,608,042...147,623,266
Ensembl chr 5:147,610,677...147,618,775
G
Nherf1
NHERF family PDZ scaffold protein 1
increases expression
ISO
1,4-dioxane results in increased expression of NHERF1 protein
CTD
PMID:22434383
NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
G
Pcna
proliferating cell nuclear antigen
increases expression
EXP
1,4-dioxane results in increased expression of PCNA mRNA
CTD
PMID:30155721
NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995
G
Phex
phosphate regulating endopeptidase X-linked
increases expression
ISO
1,4-dioxane results in increased expression of PHEX protein
CTD
PMID:20025956
NCBI chr X:37,607,553...37,856,183
Ensembl chr X:37,610,760...37,854,469
G
Phlda3
pleckstrin homology-like domain, family A, member 3
increases expression
ISO
1,4-dioxane results in increased expression of PHLDA3 mRNA
CTD
PMID:33693819
NCBI chr13:47,193,250...47,196,335
Ensembl chr13:47,193,086...47,196,335
G
Pim1
Pim-1 proto-oncogene, serine/threonine kinase
increases expression
ISO
1,4-dioxane results in increased expression of PIM1 mRNA
CTD
PMID:33693819
NCBI chr20:7,554,921...7,559,174
Ensembl chr20:7,554,921...7,559,174
G
Ppp1r10
protein phosphatase 1, regulatory subunit 10
decreases expression
ISO
1,4-dioxane results in decreased expression of PPP1R10 mRNA
CTD
PMID:33693819
NCBI chr20:2,822,995...2,838,125
Ensembl chr20:2,822,995...2,837,611
G
Pygo1
pygopus family PHD finger 1
decreases expression
ISO
1,4-dioxane results in decreased expression of PYGO1 mRNA
CTD
PMID:33693819
NCBI chr 8:73,666,467...73,684,641
Ensembl chr 8:73,665,593...73,684,869
G
Rad51ap1
RAD51 associated protein 1
increases expression
ISO
1,4-dioxane results in increased expression of RAD51AP1 protein
CTD
PMID:20025956
NCBI chr 4:159,759,454...159,772,524
Ensembl chr 4:159,759,459...159,772,524
G
Rcan2
regulator of calcineurin 2
decreases expression
ISO
1,4-dioxane results in decreased expression of RCAN2 mRNA
CTD
PMID:33693819
NCBI chr 9:16,959,478...17,174,823
Ensembl chr 9:16,959,480...17,174,856
G
Rgs1
regulator of G-protein signaling 1
decreases expression
ISO
1,4-dioxane results in decreased expression of RGS1 mRNA
CTD
PMID:33693819
NCBI chr13:56,018,529...56,022,939
Ensembl chr13:56,018,554...56,022,984
G
Rsrp1
arginine and serine rich protein 1
decreases expression
ISO
1,4-dioxane results in decreased expression of RSRP1 mRNA
CTD
PMID:33693819
NCBI chr 5:147,147,774...147,151,523
Ensembl chr 5:147,147,784...147,151,523
G
RT1-Bb
RT1 class II, locus Bb
decreases expression
ISO
1,4-dioxane results in decreased expression of H2-AB1 mRNA
CTD
PMID:33693819
NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
G
Serpina7
serpin family A member 7
increases expression
ISO
1,4-dioxane results in increased expression of SERPINA7 mRNA
CTD
PMID:33693819
NCBI chr X:102,663,242...102,722,319
Ensembl chr X:102,663,405...102,669,040
G
Slc17a8
solute carrier family 17 member 8
increases expression
ISO
1,4-dioxane results in increased expression of SLC17A8 mRNA
CTD
PMID:33693819
NCBI chr 7:23,994,212...24,049,498
Ensembl chr 7:23,994,217...24,048,079
G
Sugct
succinylCoA:glutarate-CoA transferase
decreases expression
ISO
1,4-dioxane results in decreased expression of SUGCT mRNA
CTD
PMID:33693819
NCBI chr17:47,376,392...48,234,362
Ensembl chr17:47,376,521...48,234,376
G
Sult1c2a
sulfotransferase family 1C member 2A
decreases expression
ISO
1,4-dioxane results in decreased expression of SULT1C2 mRNA
CTD
PMID:33693819
NCBI chr 9:6,873,697...6,904,736
Ensembl chr 9:6,874,249...6,904,734
G
Tgif1
TGFB-induced factor homeobox 1
increases expression
ISO
1,4-dioxane results in increased expression of TGIF1 mRNA
CTD
PMID:33693819
NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802
G
Tsc22d3
TSC22 domain family, member 3
decreases expression
ISO
1,4-dioxane results in decreased expression of TSC22D3 mRNA
CTD
PMID:33693819
NCBI chr X:104,217,898...104,277,935
Ensembl chr X:104,217,925...104,276,861
G
Ugt1a1
UDP glucuronosyltransferase family 1 member A1
decreases expression
ISO
1,4-dioxane results in decreased expression of UGT1A1 mRNA
CTD
PMID:33693819
NCBI chr 9:88,801,344...88,808,465
Ensembl chr 9:88,713,184...88,808,465
G
Bax
BCL2 associated X, apoptosis regulator
increases expression
ISO
Ponicidin increases expression of BAX protein in the stomach
RGD
PMID:25588213
RGD:127285620
NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
G
Bcl2
BCL2, apoptosis regulator
decreases expression
ISO
Ponicidin decreases expression of BCL2 protein in the stomach
RGD
PMID:25588213
RGD:127285620
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Casp3
caspase 3
increases expression
ISO
Ponicidin increases expression of CASP3 protein in the stomach
RGD
PMID:25588213
RGD:127285620
NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
G
Jak2
Janus kinase 2
decreases phosphorylation
ISO
Ponicidin decreases phosphorylation of JAK2 protein in the stomach
RGD
PMID:25588213
RGD:127285620
NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
G
Kdr
kinase insert domain receptor
decreases expression
ISO
Ponicidin decreases expression of KDR protein in the stomach
RGD
PMID:25588213
RGD:127285620
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
G
Stat3
signal transducer and activator of transcription 3
decreases phosphorylation
ISO
Ponicidin decreases phosphorylation of STAT3 protein in the stomach
RGD
PMID:25588213
RGD:127285620
NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
G
Vegfa
vascular endothelial growth factor A
decreases expression
ISO
Ponicidin decreases expression of VEGFA protein in the stomach
RGD
PMID:25588213
RGD:127285620
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all
Path 1
CHEBI ontology
19818
chemical entity
19816
atom
19816
nonmetal atom
19749
oxygen atom
19524
oxygen molecular entity
19524
organooxygen compound
19152
oxacycle
17770
dioxanes
61
2,5-Bis[(iodomercuri)methyl]-p-dioxane
0
2-Hexyl-1,3-dioxan-5-ol
0
5-Butyl-1,4-dioxan-2-one
0
5-Hexyl-1,4-dioxan-2-one
0
5-Hydroxy-2-benzyl-1,3-dioxane
0
5-Pentyl-1,4-dioxan-2-one
0
5-ethyl-1,3-dioxane-5-methanol
0
6-Butyl-1,4-dioxan-2-one
0
6-Hexyl-1,4-dioxan-2-one
0
6-Pentyl-1,4-dioxan-2-one
0
Acetaldehyde 1,3-octanediol acetal
0
Benzaldehyde glyceryl acetal
0
Brialalepolide A
0
Dihydroxyacetone (dimer)
0
Dikegulac
0
Dimethoxane
0
Dioxation
0
Glycolaldehyde dimer
0
Hexanal octane-1,3-diol acetal
0
Isoadenolin A
0
Isoadenolin B
0
Isoadenolin C
0
Linderane
0
Macrocalin B
0
Phyllostacin I
0
Plakortic acid
0
Ponicidin
7
Rugosal
0
Xerophilusin B
0
benzpyrimoxan
0
dioxane +
54
dioxanecarboxylic acid +
0
epi-silvestrol
0
lactide
0
linderadin
0
plakortide F free acid
0
silvestrol
0
trospectomycin
0
Path 2
CHEBI ontology
19818
subatomic particle
19816
composite particle
19816
hadron
19816
baryon
19816
nucleon
19816
atomic nucleus
19816
atom
19816
main group element atom
19761
p-block element atom
19761
carbon group element atom
19703
carbon atom
19698
organic molecular entity
19698
organic molecule
19656
organic cyclic compound
19461
organic heterocyclic compound
18817
organic heteromonocyclic compound
17582
dioxanes
61
2,5-Bis[(iodomercuri)methyl]-p-dioxane
0
2-Hexyl-1,3-dioxan-5-ol
0
5-Butyl-1,4-dioxan-2-one
0
5-Hexyl-1,4-dioxan-2-one
0
5-Hydroxy-2-benzyl-1,3-dioxane
0
5-Pentyl-1,4-dioxan-2-one
0
5-ethyl-1,3-dioxane-5-methanol
0
6-Butyl-1,4-dioxan-2-one
0
6-Hexyl-1,4-dioxan-2-one
0
6-Pentyl-1,4-dioxan-2-one
0
Acetaldehyde 1,3-octanediol acetal
0
Benzaldehyde glyceryl acetal
0
Brialalepolide A
0
Dihydroxyacetone (dimer)
0
Dikegulac
0
Dimethoxane
0
Dioxation
0
Glycolaldehyde dimer
0
Hexanal octane-1,3-diol acetal
0
Isoadenolin A
0
Isoadenolin B
0
Isoadenolin C
0
Linderane
0
Macrocalin B
0
Phyllostacin I
0
Plakortic acid
0
Ponicidin
7
Rugosal
0
Xerophilusin B
0
benzpyrimoxan
0
dioxane +
54
dioxanecarboxylic acid +
0
epi-silvestrol
0
lactide
0
linderadin
0
plakortide F free acid
0
silvestrol
0
trospectomycin
0