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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:1-O-(alpha-D-galactosyl)-N-hexacosanoylphytosphingosine
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Accession:CHEBI:466659 term browser browse the term
Definition:A glycophytoceramide having an alpha-D-galactosyl residue at the O-1 position and a hexacosanoyl group attached to the nitrogen.
Synonyms:exact_synonym: N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]hexacosanamide
 related_synonym: (2S,3S,4R)-1-O-(alpha-D-galactosyl)-N-hexacosanoyl-2-amino-1,3,4-octadecanetriol;   1-O-(alpha-D-galactopyranosyl)-N-hexacosanoylphytosphingosine;   Formula=C50H99NO9;   Galalpha-Cer(t18:0/26:0);   InChI=1S/C50H99NO9/c1-3-5-7-9-11-13-15-17-18-19-20-21-22-23-24-25-26-27-29-31-33-35-37-39-45(54)51-42(41-59-50-49(58)48(57)47(56)44(40-52)60-50)46(55)43(53)38-36-34-32-30-28-16-14-12-10-8-6-4-2/h42-44,46-50,52-53,55-58H,3-41H2,1-2H3,(H,51,54)/t42-,43+,44+,46-,47-,48-,49+,50-/m0/s1;   InChIKey=VQFKFAKEUMHBLV-BYSUZVQFSA-N;   KRN 7000;   SMILES=CCCCCCCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](CO[C@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O)[C@H](O)[C@H](O)CCCCCCCCCCCCCC;   alpha-GC(C26);   alpha-GalCer;   alpha-GalCer(t18:0/26:0)
 alt_id: CHEBI:40662
 xref: Beilstein:7326597;   CAS:158021-47-7
 xref_mesh: MESH:C103873
 xref: PDB:1ZT4;   PDB:2PO6;   PDBeChem:AGH;   PMID:11914907;   PMID:12473579;   PMID:15246159;   PMID:16007090;   PMID:16458002;   PMID:17431340;   PMID:17581592;   PMID:18418814;   PMID:18586489;   PMID:19502056;   PMID:20080535;   PMID:20616071;   PMID:21376639;   PMID:21394364;   PMID:29351991;   PMID:8866665;   Patent:CA2683681;   Reaxys:7326597


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1-O-(alpha-D-galactosyl)-N-hexacosanoylphytosphingosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl10 C-X-C motif chemokine ligand 10 increases expression ISO KRN 7000 results in increased expression of CXCL10 protein CTD PMID:15867097 NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975
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G Il12b interleukin 12B increases expression ISO KRN 7000 results in increased expression of IL12B protein CTD PMID:15867097 NCBI chr10:28,888,832...28,903,796
Ensembl chr10:28,893,008...28,902,903
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19812
    role 19761
      biological role 19761
        epitope 6975
          1-O-(alpha-D-galactosyl)-N-hexacosanoylphytosphingosine 2
            N-[(2S,3S,4R)-1-(alpha-D-galactosyloxy)-3,4-dihydroxyoctadecan-2-yl]hexacosanethioamide 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19812
    subatomic particle 19811
      composite particle 19811
        hadron 19811
          baryon 19811
            nucleon 19811
              atomic nucleus 19811
                atom 19811
                  main group element atom 19708
                    p-block element atom 19708
                      carbon group element atom 19630
                        carbon atom 19620
                          organic molecular entity 19620
                            organic group 18728
                              organic divalent group 18719
                                organodiyl group 18719
                                  carbonyl group 18667
                                    carbonyl compound 18667
                                      carboxylic acid 18364
                                        carboacyl group 17482
                                          univalent carboacyl group 17482
                                            carbamoyl group 17298
                                              carboxamide 17298
                                                ceramide 111
                                                  cerebroside 20
                                                    galactosylceramide 20
                                                      beta-galactosylceramide 10
                                                        N-acyl-beta-D-galactosylphytosphingosine 10
                                                          phytosphingosine 10
                                                            N-acylphytosphingosine 2
                                                              glycophytoceramide 2
                                                                1-O-(alpha-D-galactosyl)-N-hexacosanoylphytosphingosine 2
                                                                  N-[(2S,3S,4R)-1-(alpha-D-galactosyloxy)-3,4-dihydroxyoctadecan-2-yl]hexacosanethioamide 0
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