Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:3,4-dihydroxy-9,10-dioxo-9,10-dihydroanthracene-2-sulfonic acid
go back to main search page
Accession:CHEBI:40863 term browser browse the term
Definition:A dihydroxyanthraquinone that is 1,2-dihydroxyanthraquinone compound carrying an additional sulfo substituent at the 3-position. The monosodium salt is the biological stain 'alizarin red S'.
Synonyms:related_synonym: 1,2-Dihydroxy-3-sulfoanthraquinone;   1,2-Dihydroxy-3-sulfonate-9,10-anthraquinone;   3,4-Dihydroxy-2-anthraquinonesulfonic acid;   3,4-Dihydroxy-9,10-anthraquinone-2-sulfonic acid;   3,4-Dihydroxy-9,10-dioxo-2-anthracenesulfonic acid;   3-Alizarinsulfonic acid;   9,10-Dihydro-3,4-dihydroxy-9,10-dioxo-2-anthracenesulfonic acid;   ALIZARIN RED;   Alizarin Red S;   Alizarin Red S free acid;   Az-R;   Formula=C14H8O7S;   InChI=1S/C14H8O7S/c15-11-6-3-1-2-4-7(6)12(16)10-8(11)5-9(22(19,20)21)13(17)14(10)18/h1-5,17-18H,(H,19,20,21);   InChIKey=JKYKXTRKURYNGW-UHFFFAOYSA-N;   SMILES=Oc1c(O)c2C(=O)c3ccccc3C(=O)c2cc1S(O)(=O)=O
 alt_id: CHEBI:87364
 xref: Beilstein:2225330;   CAS:83-61-4;   Gmelin:379346
 xref_mesh: MESH:C004468
 xref: PDBeChem:AZN;   PMID:14500876
 cyclic_relationship: is_conjugate_acid_of CHEBI:87361


show annotations for term's descendants           Sort by:
3,4-dihydroxy-9,10-dioxo-9,10-dihydroanthracene-2-sulfonic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin affects binding ISO Alizarin Red S binds to ALB protein CTD PMID:18968587 NCBI chr14:17,607,397...17,622,814
Ensembl chr14:17,607,381...17,622,836 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19765
    role 19738
      application 19572
        dye 2950
          histological dye 250
            3,4-dihydroxy-9,10-dioxo-9,10-dihydroanthracene-2-sulfonic acid 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 19765
    subatomic particle 19763
      composite particle 19763
        hadron 19763
          baryon 19763
            nucleon 19763
              atomic nucleus 19763
                atom 19763
                  main group element atom 19712
                    p-block element atom 19712
                      carbon group element atom 19658
                        carbon atom 19654
                          organic molecular entity 19654
                            organic group 18856
                              organic divalent group 18842
                                organodiyl group 18842
                                  carbonyl group 18807
                                    carbonyl compound 18807
                                      ketone 17109
                                        cyclic ketone 15669
                                          quinone 8537
                                            acenoquinone 7612
                                              anthraquinone 510
                                                hydroxyanthraquinones 499
                                                  dihydroxyanthraquinone 342
                                                    3,4-dihydroxy-9,10-dioxo-9,10-dihydroanthracene-2-sulfonic acid 1
paths to the root