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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:[(2R,3R,4S)-3,4-dihydroxypyrrolidin-2-yl]methyl-ADP
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Accession:CHEBI:40454 term browser browse the term
Definition:A purine ribonucleoside 5'-diphosphate that has formula C15H24N6O12P2.
Synonyms:exact_synonym: adenosine 5'-(3-{[(2R,3R,4S)-3,4-dihydroxypyrrolidin-2-yl]methyl} dihydrogen diphosphate)
 related_synonym: 5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLIDIN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]ADENOSINE;   Formula=C15H24N6O12P2;   InChI=1S/C15H24N6O12P2/c16-13-9-14(19-4-18-13)21(5-20-9)15-12(25)11(24)8(32-15)3-31-35(28,29)33-34(26,27)30-2-6-10(23)7(22)1-17-6/h4-8,10-12,15,17,22-25H,1-3H2,(H,26,27)(H,28,29)(H2,16,18,19)/t6-,7+,8-,10-,11-,12-,15-/m1/s1;   InChIKey=NDQDTBCXPOIQGT-UHNJQBFTSA-N;   SMILES=Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP(O)(=O)OP(O)(=O)OC[C@H]2NC[C@H](O)[C@@H]2O)[C@@H](O)[C@H]1O;   adenosine 5'-diphosphate (hydroxymethyl)pyrrolidinediol
 xref: Beilstein:7260839;   PDBeChem:A1R


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  CHEBI ontology 19761
    chemical entity 19761
      atom 19759
        nonmetal atom 19641
          nitrogen atom 18572
            nitrogen molecular entity 18572
              organonitrogen compound 18361
                organonitrogen heterocyclic compound 17521
                  pyrrolidines 2244
                    hydroxypyrrolidine 88
                      dihydroxypyrrolidine 0
                        [(2R,3R,4S)-3,4-dihydroxypyrrolidin-2-yl]methyl-ADP 0
Path 2
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  CHEBI ontology 19761
    subatomic particle 19759
      composite particle 19759
        hadron 19759
          baryon 19759
            nucleon 19759
              atomic nucleus 19759
                atom 19759
                  main group element atom 19653
                    p-block element atom 19653
                      chalcogen 19382
                        oxygen atom 19345
                          oxygen molecular entity 19345
                            hydroxides 19071
                              oxoacid 18269
                                pnictogen oxoacid 10312
                                  phosphorus oxoacid 9233
                                    phosphoric acids 7953
                                      phosphoric acid 7953
                                        phosphoric acid derivative 7632
                                          phosphate 7632
                                            organic phosphate 7631
                                              carbohydrate phosphate 1715
                                                phospho sugar 1640
                                                  aldose phosphate 1638
                                                    aldopentose phosphate 1632
                                                      ribose phosphate 1627
                                                        ribonucleotide 1588
                                                          ribonucleoside 5'-phosphate 603
                                                            ribonucleoside 5'-diphosphate 111
                                                              purine ribonucleoside 5'-diphosphate 96
                                                                [(2R,3R,4S)-3,4-dihydroxypyrrolidin-2-yl]methyl-ADP 0
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