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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:[(2R,3R,4S)-3,4-dihydroxypyrrolidin-2-yl]methyl-ADP
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Accession:CHEBI:40454 term browser browse the term
Definition:A purine ribonucleoside 5'-diphosphate that has formula C15H24N6O12P2.
Synonyms:exact_synonym: adenosine 5'-(3-{[(2R,3R,4S)-3,4-dihydroxypyrrolidin-2-yl]methyl} dihydrogen diphosphate)
 related_synonym: 5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLIDIN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]ADENOSINE;   Formula=C15H24N6O12P2;   InChI=1S/C15H24N6O12P2/c16-13-9-14(19-4-18-13)21(5-20-9)15-12(25)11(24)8(32-15)3-31-35(28,29)33-34(26,27)30-2-6-10(23)7(22)1-17-6/h4-8,10-12,15,17,22-25H,1-3H2,(H,26,27)(H,28,29)(H2,16,18,19)/t6-,7+,8-,10-,11-,12-,15-/m1/s1;   InChIKey=NDQDTBCXPOIQGT-UHNJQBFTSA-N;   SMILES=Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP(O)(=O)OP(O)(=O)OC[C@H]2NC[C@H](O)[C@@H]2O)[C@@H](O)[C@H]1O;   adenosine 5'-diphosphate (hydroxymethyl)pyrrolidinediol
 xref: Beilstein:7260839;   PDBeChem:A1R


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  CHEBI ontology 880
    chemical entity 880
      atom 865
        nonmetal atom 845
          nitrogen atom 331
            nitrogen molecular entity 331
              organonitrogen compound 319
                organonitrogen heterocyclic compound 220
                  pyrrolidines 23
                    hydroxypyrrolidine 0
                      dihydroxypyrrolidine 0
                        [(2R,3R,4S)-3,4-dihydroxypyrrolidin-2-yl]methyl-ADP 0
Path 2
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  CHEBI ontology 880
    subatomic particle 865
      composite particle 865
        hadron 865
          baryon 865
            nucleon 865
              atomic nucleus 865
                atom 865
                  main group element atom 855
                    p-block element atom 852
                      chalcogen 814
                        oxygen atom 761
                          oxygen molecular entity 761
                            hydroxides 686
                              oxoacid 311
                                pnictogen oxoacid 59
                                  phosphorus oxoacid 57
                                    phosphoric acids 48
                                      phosphoric acid 48
                                        phosphoric acid derivative 48
                                          phosphate 48
                                            organic phosphate 48
                                              carbohydrate phosphate 26
                                                phospho sugar 14
                                                  aldose phosphate 14
                                                    aldopentose phosphate 14
                                                      ribose phosphate 14
                                                        ribonucleotide 14
                                                          ribonucleoside 5'-phosphate 5
                                                            ribonucleoside 5'-diphosphate 0
                                                              purine ribonucleoside 5'-diphosphate 0
                                                                [(2R,3R,4S)-3,4-dihydroxypyrrolidin-2-yl]methyl-ADP 0
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