Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:crocetin
go back to main search page
Accession:CHEBI:3918 term browser browse the term
Definition:A 20-carbon dicarboxylic acid which is a diterpenoid and natural carotenoid. Found in the crocus flower, it has been administered as an anti-fatigue dietary supplement.
Synonyms:exact_synonym: (2E,4E,6E,8E,10E,12E,14E)-2,6,11,15-tetramethylhexadeca-2,4,6,8,10,12,14-heptaenedioic acid;   8,8'-diapocarotene-8,8'-dioic acid
 related_synonym: 8,8'-diapo-8,8'-carotenedioic acid;   8,8'-diapo-psi,psi-carotenedioic acid;   8,8'-diapocarotenedioic acid;   Formula=C20H24O4;   InChI=1S/C20H24O4/c1-15(11-7-13-17(3)19(21)22)9-5-6-10-16(2)12-8-14-18(4)20(23)24/h5-14H,1-4H3,(H,21,22)(H,23,24)/b6-5+,11-7+,12-8+,15-9+,16-10+,17-13+,18-14+;   InChIKey=PANKHBYNKQNAHN-MQQNZMFNSA-N;   SMILES=CC(\\C=C\\C=C(/C)C(O)=O)=C/C=C/C=C(C)/C=C/C=C(\\C)C(O)=O;   trans-crocetin
 xref: Beilstein:1715455;   CAS:27876-94-4;   KEGG:C08588;   KNApSAcK:C00003768;   LIPID_MAPS_instance:LMPR0104010020
 xref_mesh: MESH:C010561
 xref: MetaCyc:CPD-8662;   PMID:12065218;   PMID:15605174;   PMID:16272698;   PMID:19358927;   PMID:20041429;   PMID:20803418;   PMID:20854811;   PMID:21031628;   PMID:21112749;   PMID:21224437;   PMID:21466430;   PMID:21741458;   Reaxys:1715455;   Wikipedia:Crocetin
 cyclic_relationship: is_conjugate_acid_of CHEBI:62767


show annotations for term's descendants           Sort by:
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 499
    role 499
      chemical role 425
        antioxidant 43
          crocetin 0
            beta-D-gentiobiosyl crocetin + 0
            beta-D-glucosyl crocetin 0
            bis(beta-D-glucosyl) crocetin 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 499
    subatomic particle 499
      composite particle 499
        hadron 499
          baryon 499
            nucleon 499
              atomic nucleus 499
                atom 499
                  main group element atom 492
                    p-block element atom 492
                      carbon group element atom 481
                        carbon atom 480
                          organic molecular entity 480
                            heteroorganic entity 476
                              organochalcogen compound 430
                                organooxygen compound 428
                                  carbon oxoacid 368
                                    carboxylic acid 368
                                      monocarboxylic acid 92
                                        fatty acid 60
                                          unsaturated fatty acid 4
                                            polyunsaturated fatty acid 4
                                              carotenoic acid 0
                                                crocetin 0
                                                  beta-D-gentiobiosyl crocetin + 0
                                                  beta-D-glucosyl crocetin 0
                                                  bis(beta-D-glucosyl) crocetin 0
paths to the root