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The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at The data is made available under the Creative Commons License (CC BY 3.0, For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

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Accession:CHEBI:38309 term browser browse the term
Definition:A nucleoside diphosphate analogue that has formula C10H15N5O10P2S.
Synonyms:exact_synonym: guanosine 5'-(trihydrogen 3-thiodiphosphate)
 related_synonym: Formula=C10H15N5O10P2S;   Guanosine 5'-O-(2-thiodiphosphate);   Guanyl-5'-yl thiophosphate;   InChI=1S/C10H15N5O10P2S/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(24-9)1-23-26(19,20)25-27(21,22)28/h2-3,5-6,9,16-17H,1H2,(H,19,20)(H2,21,22,28)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1;   InChIKey=QJXJXBXFIOTYHB-UUOKFMHZSA-N;   SMILES=Nc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](COP(O)(=O)OP(O)(O)=S)[C@@H](O)[C@H]1O
 xref: CAS:71376-97-1
 xref_mesh: MESH:C023427

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GDP-beta-S term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 multiple interactions ISO guanosine 5'-O-(2-thiodiphosphate) inhibits the reaction [Serotonin results in increased expression of ACAT1 protein] CTD PMID:16157345 NCBI chr 8:58,166,990...58,195,884
Ensembl chr 8:58,166,990...58,195,884
JBrowse link
G Trpc6 transient receptor potential cation channel, subfamily C, member 6 decreases activity ISO guanosine 5'-O-(2-thiodiphosphate) results in decreased activity of TRPC6 protein CTD PMID:11179201 NCBI chr 8:6,811,543...6,917,534
Ensembl chr 8:6,811,543...6,917,535
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  CHEBI ontology 19883
    role 19833
      biological role 19833
        inhibitor 18313
          uncoupling protein inhibitor 130
            GDP 11
              GDP-beta-S 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 19883
    subatomic particle 19881
      composite particle 19881
        hadron 19881
          baryon 19881
            nucleon 19881
              atomic nucleus 19881
                atom 19881
                  main group element atom 19771
                    p-block element atom 19771
                      chalcogen 19464
                        oxygen atom 19425
                          oxygen molecular entity 19425
                            hydroxides 19147
                              oxoacid 18286
                                pnictogen oxoacid 10306
                                  phosphorus oxoacid 9226
                                    phosphoric acids 7943
                                      phosphoric acid 7943
                                        phosphoric acid derivative 7624
                                          phosphate 7624
                                            organic phosphate 7623
                                              carbohydrate phosphate 1709
                                                phospho sugar 1633
                                                  aldose phosphate 1631
                                                    aldopentose phosphate 1625
                                                      ribose phosphate 1620
                                                        ribonucleotide 1581
                                                          purine ribonucleotide 1552
                                                            guanyl ribonucleotide 136
                                                              guanosine phosphate 67
                                                                guanosine 5'-phosphate 67
                                                                  GDP 11
                                                                    GDP-beta-S 2
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