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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:dye
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Accession:CHEBI:37958 term browser browse the term
Synonyms:related_synonym: Farbstoff;   Farbstoffe;   colorante;   colorantes;   dyes;   teinture;   teintures


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1,4-phenylenediamine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP8 caspase 8 increases activity
multiple interactions
EXP 4-phenylenediamine results in increased activity of CASP8 protein
benzyloxycarbonyl-isoleucyl-glutamyl-threonyl-aspartic acid fluoromethyl ketone inhibits the reaction [4-phenylenediamine results in increased activity of CASP8 protein]
CTD PMID:20156547 NCBI chr37:10,362,071...10,402,108
Ensembl chr37:10,391,048...10,401,822
JBrowse link
G CASP9 caspase 9 multiple interactions
increases activity
EXP benzyloxycarbonyl-leucyl-glutamyl-histidyl-aspartic acid fluoromethyl ketone inhibits the reaction [4-phenylenediamine results in increased activity of CASP9 protein] CTD PMID:20156547 NCBI chr 2:82,033,759...82,076,710
Ensembl chr 2:82,031,563...82,090,484
JBrowse link
bromosulfophthalein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHRS4 dehydrogenase/reductase 4 decreases activity EXP Sulfobromophthalein results in decreased activity of DHRS4 protein CTD PMID:17827741 NCBI chr 8:4,046,532...4,058,498
Ensembl chr 8:4,046,544...4,084,744
JBrowse link
G SLCO1B3 solute carrier organic anion transporter family member 1B3 increases transport EXP SLCO1B3 protein results in increased transport of Sulfobromophthalein CTD PMID:20079461 NCBI chr27:26,411,008...26,496,174
Ensembl chr27:26,411,010...26,470,989
JBrowse link
calcein am term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC1 ATP binding cassette subfamily C member 1 affects export EXP ABCC1 protein affects the export of calcein AM CTD PMID:12516967 NCBI chr 6:27,855,702...27,950,140
Ensembl chr 6:27,855,702...27,989,331
JBrowse link
rhodamine 123 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP binding cassette subfamily B member 1 increases export EXP ABCB1 protein results in increased export of Rhodamine 123 CTD PMID:28093773 NCBI chr14:13,644,891...13,852,829
Ensembl chr14:13,542,647...13,742,727
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 221
    role 221
      application 189
        dye 6
          1,4-phenylenediamine + 2
          2,3,5-triphenyltetrazolium chloride 0
          2,6-dichloroindophenol 0
          2-chloro-1,4-phenylenediamine 0
          2-chloro-1,4-phenylenediamine sulfate 0
          3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide 0
          4-(2-hydroxy-5-methylphenylazo)acetanilide 0
          4-(4-nitrophenylazo)aniline 0
          4-(phenylazo)aniline 0
          4-\{[4-(dimethylamino)phenyl]diazenyl\}phenyl-beta-lactoside 0
          5-[(4,6-diamino-1,3,5-triazin-2-yl)amino]-4-hydroxy-3-[(2-sulfophenyl)diazenyl]naphthalene-2,7-disulfonic acid 0
          BODIPY dye + 0
          Disperse Blue 124 0
          Disperse Red 1 0
          Janus Green B chloride 0
          LAC dye 0
          Reactive Blue 5 0
          Reactive Blue 5 quinol form 0
          Reactive red 120 0
          Solvent yellow 56 0
          Sudan I 0
          acid red 4 0
          alizarin + 0
          bromocresol purple 0
          bromophenol blue 0
          bromosulfophthalein 2
          bromosulfophthalein sodium 0
          bromosulfophthalein(2-) + 0
          bromothymol blue 0
          clofazimine 0
          cresol red 0
          curcumin + 0
          cyanine dye + 0
          fluorescent dye + 2
          histological dye + 0
          indophenol + 0
          kermesic acid 0
          laccaic acid A + 0
          laccaic acid B + 0
          laccaic acid C + 0
          laccaic acid D + 0
          methyl red 0
          neutral red 0
          neutral red base 0
          patent blue V 0
          procion orange MX-2R 0
          procion red MX-5B 0
          procion yellow MX-4R 0
          quinizarin 0
          quinoline yellow 0
          remazole black-GR 0
          remazole black-GR (4-) + 0
          remazole orange-3R 0
          remazole orange-3R(2-) + 0
          spirit blue 0
          spirit blue base 0
          tetrazolium blue 0
          tetrazolium violet 0
          trypan blue sulfonic acid 0
          xanthene dye + 2
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