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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:allose
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Accession:CHEBI:37690 term browser browse the term
Definition:An aldohexose that is the C-3 epimer of glucose.
Synonyms:exact_synonym: allo-hexose
 related_synonym: All;   Formula=C6H12O6
 alt_id: CHEBI:33927;   CHEBI:33935
 xref_mesh: MESH:C002055
 xref: PMID:24696548;   Wikipedia:Allose


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allose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccna2 cyclin A2 decreases expression ISO allose results in decreased expression of CCNA2 mRNA CTD PMID:18930000 NCBI chr 2:123,274,727...123,282,266
Ensembl chr 2:123,275,881...123,282,214
JBrowse link
G Ccnd1 cyclin D1 multiple interactions
decreases expression
ISO [allose co-treated with Fluorouracil] results in decreased expression of CCND1 protein; Fluorouracil promotes the reaction [allose results in decreased expression of CCND1 mRNA] CTD PMID:18930000 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Ccne1 cyclin E1 decreases expression ISO allose results in decreased expression of CCNE1 mRNA CTD PMID:18930000 NCBI chr 1:94,485,830...94,495,112
Ensembl chr 1:94,485,832...94,494,980
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B increases expression ISO allose results in increased expression of CDKN1B protein CTD PMID:18930000 NCBI chr 4:168,689,043...168,694,159
Ensembl chr 4:168,689,163...168,693,964
JBrowse link
G Tp53 tumor protein p53 increases expression
multiple interactions
ISO allose results in increased expression of TP53 mRNA; allose results in increased expression of TP53 protein
Fluorouracil promotes the reaction [allose results in increased expression of TP53 protein]
CTD PMID:18930000 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Txnip thioredoxin interacting protein multiple interactions
increases expression
ISO [allose co-treated with Fluorouracil] results in increased expression of TXNIP protein; Fluorouracil promotes the reaction [allose results in increased expression of TXNIP mRNA]
allose results in increased expression of TXNIP mRNA; allose results in increased expression of TXNIP protein
CTD PMID:18930000 NCBI chr 2:198,683,168...198,686,971
Ensembl chr 2:198,683,159...198,686,974
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19787
    role 19734
      biological role 19734
        biochemical role 19282
          metabolite 19263
            eukaryotic metabolite 18908
              plant metabolite 17360
                allose 6
                  D-allose + 0
                  L-allose + 0
                  aldehydo-allose + 0
                  allofuranose + 0
                  allopyranose + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19787
    subatomic particle 19784
      composite particle 19784
        hadron 19784
          baryon 19784
            nucleon 19784
              atomic nucleus 19784
                atom 19784
                  main group element atom 19672
                    p-block element atom 19672
                      carbon group element atom 19574
                        carbon atom 19563
                          organic molecular entity 19563
                            heteroorganic entity 19148
                              organochalcogen compound 18856
                                organooxygen compound 18778
                                  carbohydrates and carbohydrate derivatives 12180
                                    carbohydrate 12180
                                      monosaccharide 4023
                                        aldose 2537
                                          aldohexose 2184
                                            allose 6
                                              D-allose + 0
                                              L-allose + 0
                                              aldehydo-allose + 0
                                              allofuranose + 0
                                              allopyranose + 0
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