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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:allose
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Accession:CHEBI:37690 term browser browse the term
Definition:An aldohexose that is the C-3 epimer of glucose.
Synonyms:exact_synonym: allo-hexose
 related_synonym: All;   Formula=C6H12O6
 alt_id: CHEBI:33927;   CHEBI:33935
 xref_mesh: MESH:C002055
 xref: PMID:24696548;   Wikipedia:Allose


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allose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccna2 cyclin A2 decreases expression ISO allose results in decreased expression of CCNA2 mRNA CTD PMID:18930000 NCBI chr 2:119,427,239...119,433,645
Ensembl chr 2:119,426,089...119,433,577 		JBrowse link
G Ccnd1 cyclin D1 multiple interactions
decreases expression		 ISO [allose co-treated with Fluorouracil] results in decreased expression of CCND1 protein; Fluorouracil promotes the reaction [allose results in decreased expression of CCND1 mRNA] CTD PMID:18930000 NCBI chr 1:200,089,002...200,098,524
Ensembl chr 1:200,089,002...200,098,602 		JBrowse link
G Ccne1 cyclin E1 decreases expression ISO allose results in decreased expression of CCNE1 mRNA CTD PMID:18930000 NCBI chr 1:90,781,947...90,791,188
Ensembl chr 1:90,781,949...90,791,101 		JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B increases expression ISO allose results in increased expression of CDKN1B protein CTD PMID:18930000 NCBI chr 4:167,760,067...167,765,177
Ensembl chr 4:167,760,181...167,764,982 		JBrowse link
G Tp53 tumor protein p53 increases expression
multiple interactions		 ISO allose results in increased expression of TP53 mRNA; allose results in increased expression of TP53 protein
Fluorouracil promotes the reaction [allose results in increased expression of TP53 protein]		 CTD PMID:18930000 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Txnip thioredoxin interacting protein multiple interactions
increases expression		 ISO [allose co-treated with Fluorouracil] results in increased expression of TXNIP protein; Fluorouracil promotes the reaction [allose results in increased expression of TXNIP mRNA]
allose results in increased expression of TXNIP mRNA; allose results in increased expression of TXNIP protein		 CTD PMID:18930000 NCBI chr 2:184,093,079...184,096,882
Ensembl chr 2:184,092,991...184,096,886 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19874
    role 19844
      biological role 19842
        biochemical role 19549
          metabolite 19537
            eukaryotic metabolite 19362
              plant metabolite 17981
                allose 6
                  D-allose + 0
                  L-allose + 0
                  aldehydo-allose + 0
                  allofuranose + 0
                  allopyranose + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19874
    subatomic particle 19872
      composite particle 19872
        hadron 19872
          baryon 19872
            nucleon 19872
              atomic nucleus 19872
                atom 19872
                  main group element atom 19811
                    p-block element atom 19811
                      carbon group element atom 19751
                        carbon atom 19748
                          organic molecular entity 19748
                            heteroorganic entity 19505
                              organochalcogen compound 19268
                                organooxygen compound 19184
                                  carbohydrates and carbohydrate derivatives 15285
                                    carbohydrate 15285
                                      monosaccharide 4875
                                        aldose 3231
                                          aldohexose 2883
                                            allose 6
                                              D-allose + 0
                                              L-allose + 0
                                              aldehydo-allose + 0
                                              allofuranose + 0
                                              allopyranose + 0
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