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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:allose
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Accession:CHEBI:37690 term browser browse the term
Definition:An aldohexose that is the C-3 epimer of glucose.
Synonyms:exact_synonym: allo-hexose
 related_synonym: All;   Formula=C6H12O6
 alt_id: CHEBI:33927;   CHEBI:33935
 xref_mesh: MESH:C002055
 xref: PMID:24696548;   Wikipedia:Allose


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allose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccna2 cyclin A2 decreases expression ISO allose results in decreased expression of CCNA2 mRNA CTD PMID:18930000 NCBI chr 2:119,427,239...119,433,645
Ensembl chr 2:119,426,089...119,433,577
JBrowse link
G Ccnd1 cyclin D1 multiple interactions
decreases expression
ISO [allose co-treated with Fluorouracil] results in decreased expression of CCND1 protein; Fluorouracil promotes the reaction [allose results in decreased expression of CCND1 mRNA] CTD PMID:18930000 NCBI chr 1:200,089,002...200,098,524
Ensembl chr 1:200,089,002...200,098,602
JBrowse link
G Ccne1 cyclin E1 decreases expression ISO allose results in decreased expression of CCNE1 mRNA CTD PMID:18930000 NCBI chr 1:90,781,947...90,791,188
Ensembl chr 1:90,781,949...90,791,101
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B increases expression ISO allose results in increased expression of CDKN1B protein CTD PMID:18930000 NCBI chr 4:167,760,067...167,765,177
Ensembl chr 4:167,760,181...167,764,982
JBrowse link
G Tp53 tumor protein p53 increases expression
multiple interactions
ISO allose results in increased expression of TP53 mRNA; allose results in increased expression of TP53 protein
Fluorouracil promotes the reaction [allose results in increased expression of TP53 protein]
CTD PMID:18930000 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Txnip thioredoxin interacting protein multiple interactions
increases expression
ISO [allose co-treated with Fluorouracil] results in increased expression of TXNIP protein; Fluorouracil promotes the reaction [allose results in increased expression of TXNIP mRNA]
allose results in increased expression of TXNIP mRNA; allose results in increased expression of TXNIP protein
CTD PMID:18930000 NCBI chr 2:184,093,079...184,096,882
Ensembl chr 2:184,092,991...184,096,886
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19812
    role 19761
      biological role 19761
        biochemical role 19381
          metabolite 19356
            eukaryotic metabolite 19044
              plant metabolite 17455
                allose 6
                  D-allose + 0
                  L-allose + 0
                  aldehydo-allose + 0
                  allofuranose + 0
                  allopyranose + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19812
    subatomic particle 19811
      composite particle 19811
        hadron 19811
          baryon 19811
            nucleon 19811
              atomic nucleus 19811
                atom 19811
                  main group element atom 19708
                    p-block element atom 19708
                      carbon group element atom 19630
                        carbon atom 19620
                          organic molecular entity 19620
                            heteroorganic entity 19283
                              organochalcogen compound 19054
                                organooxygen compound 19004
                                  carbohydrates and carbohydrate derivatives 12341
                                    carbohydrate 12341
                                      monosaccharide 4298
                                        aldose 2673
                                          aldohexose 2310
                                            allose 6
                                              D-allose + 0
                                              L-allose + 0
                                              aldehydo-allose + 0
                                              allofuranose + 0
                                              allopyranose + 0
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