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ONTOLOGY REPORT - ANNOTATIONS


Term:apo carotenoid triterpenoid
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Accession:CHEBI:36783 term browser browse the term
Definition:A triterpenoid compound arising from loss of part of the carotene skeleton.
Synonyms:related_synonym: apocarotenoid triterpenoid;   apocarotenoid triterpenoids


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8'-apo-beta,psi-caroten-8'-al term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link 2 260,124,418 260,148,589 RGD:6480464
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide JBrowse link 2 243,728,500 243,740,907 RGD:6480464
G Aldh1b1 aldehyde dehydrogenase 1 family, member B1 JBrowse link 5 61,382,351 61,387,359 RGD:6480464
G Aldh3b1 aldehyde dehydrogenase 3 family, member B1 JBrowse link 1 219,145,457 219,181,536 RGD:6480464
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 JBrowse link 5 158,090,238 158,115,725 RGD:6480464
G Ank2 ankyrin 2 JBrowse link 2 231,224,643 231,522,655 RGD:6480464
G Ank3 ankyrin 3 JBrowse link 20 19,948,767 20,480,628 RGD:6480464
G Asah1 N-acylsphingosine amidohydrolase 1 JBrowse link 16 53,998,604 54,030,006 RGD:6480464
G Asb1 ankyrin repeat and SOCS box-containing 1 JBrowse link 9 98,668,231 98,689,471 RGD:6480464
G Asb9 ankyrin repeat and SOCS box-containing 9 JBrowse link X 31,700,637 31,745,790 RGD:6480464
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:6480464
G Bco2 beta-carotene oxygenase 2 JBrowse link 8 54,965,577 54,990,604 RGD:6480464
G Casp8ap2 caspase 8 associated protein 2 JBrowse link 5 47,853,699 47,891,147 RGD:6480464
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:6480464
G Cldn10 claudin 10 JBrowse link 15 104,026,590 104,115,748 RGD:6480464
G Cldn18 claudin 18 JBrowse link 8 107,933,725 107,960,656 RGD:6480464
G Col1a1 collagen type I alpha 1 chain JBrowse link 10 82,745,801 82,762,790 RGD:6480464
G Col4a1 collagen type IV alpha 1 chain JBrowse link 16 83,522,162 83,632,153 RGD:6480464
G Col4a2 collagen type IV alpha 2 chain JBrowse link 16 83,386,388 83,522,169 RGD:6480464
G Crabp2 cellular retinoic acid binding protein 2 JBrowse link 2 187,322,416 187,326,794 RGD:6480464
G Ctsb cathepsin B JBrowse link 15 46,316,741 46,337,613 RGD:6480464
G Cxcl12 C-X-C motif chemokine ligand 12 JBrowse link 4 149,261,044 149,273,891 RGD:6480464
G Cxcl6 C-X-C motif chemokine ligand 6 JBrowse link 14 18,860,201 18,920,839 RGD:6480464
G Cxcl9 C-X-C motif chemokine ligand 9 JBrowse link 14 17,228,832 17,233,743 RGD:6480464
G Cxcr4 C-X-C motif chemokine receptor 4 JBrowse link 13 45,314,952 45,318,856 RGD:6480464
G Dlx2 distal-less homeobox 2 JBrowse link 3 58,180,088 58,181,971 RGD:6480464
G Dlx4 distal-less homeobox 4 JBrowse link 10 82,958,525 82,963,919 RGD:6480464
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit JBrowse link 1 80,293,574 80,307,334 RGD:6480464
G Ets1 ETS proto-oncogene 1, transcription factor JBrowse link 8 33,756,634 33,879,625 RGD:6480464
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:6480464
G Fasn fatty acid synthase JBrowse link 10 109,987,735 110,005,901 RGD:6480464
G Gata6 GATA binding protein 6 JBrowse link 18 2,415,821 2,447,087 RGD:6480464
G Gbp1 guanylate binding protein 1 JBrowse link 2 248,343,334 248,423,402 RGD:6480464
G Gstk1 glutathione S-transferase kappa 1 JBrowse link 4 71,621,777 71,626,096 RGD:6480464
G Gstm2 glutathione S-transferase mu 2 JBrowse link 2 210,778,041 210,782,807 RGD:6480464
G Gstm3l glutathione S-transferase mu 3-like JBrowse link 2 210,761,729 210,766,501 RGD:6480464
G Gstm4 glutathione S-transferase mu 4 JBrowse link 2 210,834,013 210,839,242 RGD:6480464
G Gstz1 glutathione S-transferase zeta 1 JBrowse link 6 111,176,798 111,187,246 RGD:6480464
G Hoxa7 homeobox A7 JBrowse link 4 82,184,299 82,187,890 RGD:6480464
G Hoxb6 homeo box B6 JBrowse link 10 84,147,331 84,150,238 RGD:6480464
G Hoxc10 homeo box C10 JBrowse link 7 144,577,578 144,582,802 RGD:6480464
G Irf8 interferon regulatory factor 8 JBrowse link 19 54,314,859 54,336,643 RGD:6480464
G Irx4 iroquois homeobox 4 JBrowse link 1 32,634,774 32,645,151 RGD:6480464
G Itgb4 integrin subunit beta 4 JBrowse link 10 104,524,000 104,560,180 RGD:6480464
G Ivl involucrin JBrowse link 2 192,761,171 192,773,346 RGD:6480464
G Krt17 keratin 17 JBrowse link 10 88,158,993 88,163,712 RGD:6480464
G Krt2 keratin 2 JBrowse link 7 143,412,858 143,420,463 RGD:6480464
G Krt7 keratin 7 JBrowse link 7 143,059,731 143,075,907 RGD:6480464
G Lhx3 LIM homeobox 3 JBrowse link 3 3,653,861 3,662,509 RGD:6480464
G Mcl1 MCL1 apoptosis regulator, BCL2 family member JBrowse link 2 197,786,212 197,788,992 RGD:6480464
G Meis2 Meis homeobox 2 JBrowse link 3 107,560,172 107,762,732 RGD:6480464
G Meox1 mesenchyme homeobox 1 JBrowse link 10 89,797,011 89,817,009 RGD:6480464
G Mnx1 motor neuron and pancreas homeobox 1 JBrowse link 4 2,376,350 2,381,308 RGD:6480464
G Msh5 mutS homolog 5 JBrowse link 20 5,020,690 5,037,125 RGD:6480464
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming JBrowse link 1 214,725,482 214,756,653 RGD:6480464
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:6480464
G Olr1 oxidized low density lipoprotein receptor 1 JBrowse link 4 163,239,853 163,261,937 RGD:6480464
G Pcdhgc3 protocadherin gamma subfamily C, 3 JBrowse link 18 30,954,552 30,971,113 RGD:6480464
G Plscr1 phospholipid scramblase 1 JBrowse link 8 99,625,523 99,645,882 RGD:6480464
G Plscr3 phospholipid scramblase 3 JBrowse link 10 56,452,632 56,458,390 RGD:6480464
G Plscr4 phospholipid scramblase 4 JBrowse link 8 99,880,073 99,917,733 RGD:6480464
G Rad51ap1 RAD51 associated protein 1 JBrowse link 4 159,469,803 159,482,869 RGD:6480464
G Rad51d RAD51 paralog D JBrowse link 10 70,222,703 70,241,352 RGD:6480464
G Rara retinoic acid receptor, alpha JBrowse link 10 86,838,819 86,884,224 RGD:6480464
G Rarb retinoic acid receptor, beta JBrowse link 15 9,915,223 10,262,599 RGD:6480464
G Rarres1 retinoic acid receptor responder 1 JBrowse link 2 164,650,722 164,684,982 RGD:6480464
G Six6 SIX homeobox 6 JBrowse link 6 95,816,749 95,821,729 RGD:6480464
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:6480464
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 JBrowse link 6 111,334,408 111,417,960 RGD:6480464
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link 10 46,570,996 46,593,021 RGD:6480464
G Tgm4 transglutaminase 4 JBrowse link 8 132,117,279 132,157,485 RGD:6480464
G Tnfrsf9 TNF receptor superfamily member 9 JBrowse link 5 168,009,245 168,035,813 RGD:6480464
G Tnfsf10 TNF superfamily member 10 JBrowse link 2 113,008,008 113,026,899 RGD:6480464
G Txndc9 thioredoxin domain containing 9 JBrowse link 9 44,647,707 44,657,779 RGD:6480464
G Xrcc3 X-ray repair cross complementing 3 JBrowse link 6 136,366,917 136,380,751 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19779
    chemical entity 19778
      atom 19777
        nonmetal atom 19651
          carbon atom 19548
            organic molecular entity 19548
              isoprenoid 9512
                apo carotenoid 120
                  apo carotenoid triterpenoid 75
                    (3R)-3-hydroxy-8'-apo-beta-carotenal 0
                    (3R)-3-hydroxy-8'-apo-beta-carotenol 0
                    4,4'-diapo-zeta-carotene + 0
                    4,4'-diapolycopen-4-al 0
                    4,4'-diapolycopen-4-oic acid 0
                    4,4'-diapolycopenedioic acid 0
                    4,4'-diaponeurosporenal 0
                    4,4'-diaponeurosporene 0
                    4,4'-diaponeurosporenoic acid 0
                    4,4'-diapophytoene + 0
                    4,4'-diapophytofluene + 0
                    8'-apo-beta,psi-caroten-8'-al 75
                    8'-apo-beta-carotenol 0
                    staphyloxanthin 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19779
    subatomic particle 19777
      composite particle 19777
        hadron 19777
          baryon 19777
            nucleon 19777
              atomic nucleus 19777
                atom 19777
                  main group element atom 19664
                    main group molecular entity 19664
                      s-block molecular entity 19406
                        hydrogen molecular entity 19397
                          hydrides 18386
                            organic hydride 17747
                              organic fundamental parent 17747
                                hydrocarbon 17257
                                  terpene 9512
                                    tetraterpene 411
                                      carotene 411
                                        carotenoid 411
                                          apo carotenoid triterpenoid 75
                                            (3R)-3-hydroxy-8'-apo-beta-carotenal 0
                                            (3R)-3-hydroxy-8'-apo-beta-carotenol 0
                                            4,4'-diapo-zeta-carotene + 0
                                            4,4'-diapolycopen-4-al 0
                                            4,4'-diapolycopen-4-oic acid 0
                                            4,4'-diapolycopenedioic acid 0
                                            4,4'-diaponeurosporenal 0
                                            4,4'-diaponeurosporene 0
                                            4,4'-diaponeurosporenoic acid 0
                                            4,4'-diapophytoene + 0
                                            4,4'-diapophytofluene + 0
                                            8'-apo-beta,psi-caroten-8'-al 75
                                            8'-apo-beta-carotenol 0
                                            staphyloxanthin 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.