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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:5beta-cholanic acids
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Accession:CHEBI:36248 term browser browse the term
Definition:Members of the class of cholanic acids based on a 5beta-cholane skeleton.


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3-oxo-5beta-cholanic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPNE6 copine 6 decreases activity EXP 3-oxocholan-24-oic acid results in decreased activity of DHRS4 protein CTD PMID:17827741 NCBI chr 8:4,046,532...4,058,498
Ensembl chr 8:4,046,544...4,084,744 		JBrowse link
lithocholic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPNE6 copine 6 decreases activity EXP Lithocholic Acid results in decreased activity of DHRS4 protein CTD PMID:17827741 NCBI chr 8:4,046,532...4,058,498
Ensembl chr 8:4,046,544...4,084,744 		JBrowse link
taurocholic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLCO1B2 solute carrier organic anion transporter family member 1B2 increases transport EXP SLCO1B3 protein results in increased transport of Taurocholic Acid CTD PMID:20079461 NCBI chr27:26,411,008...26,496,174
Ensembl chr27:26,411,010...26,470,989 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 499
    chemical entity 499
      atom 499
        nonmetal atom 492
          carbon atom 480
            organic molecular entity 480
              lipid 111
                steroid 40
                  5beta steroid 3
                    5beta-cholanic acids 2
                      5beta-cholanic acid + 2
                      hydroxy-5beta-cholanic acid + 2
                      hyodeoxycholic acid + 0
                      oxo-5beta-cholanic acid + 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 499
    subatomic particle 499
      composite particle 499
        hadron 499
          baryon 499
            nucleon 499
              atomic nucleus 499
                atom 499
                  main group element atom 492
                    p-block element atom 492
                      carbon group element atom 481
                        carbon atom 480
                          organic molecular entity 480
                            organic molecule 471
                              organic cyclic compound 454
                                organic polycyclic compound 65
                                  steroid 40
                                    steroid fundamental parent 20
                                      cholane 2
                                        cholanoid 2
                                          cholanic acids 2
                                            5beta-cholanic acids 2
                                              5beta-cholanic acid + 2
                                              hydroxy-5beta-cholanic acid + 2
                                              hyodeoxycholic acid + 0
                                              oxo-5beta-cholanic acid + 1
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