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ONTOLOGY REPORT - ANNOTATIONS


Term:cyclopentanones
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Accession:CHEBI:36140 term browser browse the term
Definition:Any alicyclic ketone that consists of a cyclopentane skeleton substituted by at least one oxo group.


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16,16-dimethylprostaglandin E2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKT1 AKT serine/threonine kinase 1 JBrowse link 14 104,769,349 104,795,748 RGD:6480464
G BAX BCL2 associated X, apoptosis regulator JBrowse link 19 48,954,825 48,961,798 RGD:6480464
G EGFR epidermal growth factor receptor JBrowse link 7 55,019,017 55,211,628 RGD:6480464
G HPGD 15-hydroxyprostaglandin dehydrogenase JBrowse link 4 174,490,175 174,522,898 RGD:6480464
G MPO myeloperoxidase JBrowse link 17 58,269,855 58,280,935 RGD:6480464
G NOS2 nitric oxide synthase 2 JBrowse link 17 27,756,766 27,800,529 RGD:6480464
G PTGS2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 186,671,791 186,680,423 RGD:6480464
G TNF tumor necrosis factor JBrowse link 6 31,575,565 31,578,336 RGD:6480464
AH23848 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKT1 AKT serine/threonine kinase 1 JBrowse link 14 104,769,349 104,795,748 RGD:6480464
G ARRB1 arrestin beta 1 JBrowse link 11 75,260,122 75,351,662 RGD:6480464
G AXIN1 axin 1 JBrowse link 16 287,440 355,226 RGD:6480464
G BAD BCL2 associated agonist of cell death JBrowse link 11 64,269,828 64,284,704 RGD:6480464
G BAX BCL2 associated X, apoptosis regulator JBrowse link 19 48,954,825 48,961,798 RGD:6480464
G BCL2 BCL2 apoptosis regulator JBrowse link 18 63,123,346 63,320,280 RGD:6480464
G BCL2L1 BCL2 like 1 JBrowse link 20 31,664,452 31,723,963 RGD:6480464
G CASP3 caspase 3 JBrowse link 4 184,627,696 184,649,475 RGD:6480464
G CTNNB1 catenin beta 1 JBrowse link 3 41,199,422 41,240,445 RGD:6480464
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 JBrowse link 15 51,208,057 51,338,596 RGD:6480464
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 JBrowse link 2 38,067,509 38,076,151 RGD:6480464
G EGFR epidermal growth factor receptor JBrowse link 7 55,019,017 55,211,628 RGD:6480464
G EGR1 early growth response 1 JBrowse link 5 138,465,479 138,469,303 RGD:6480464
G FOS Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 14 75,278,828 75,282,230 RGD:6480464
G GSK3B glycogen synthase kinase 3 beta JBrowse link 3 119,821,321 120,095,823 RGD:6480464
G IL1R1 interleukin 1 receptor type 1 JBrowse link 2 102,069,638 102,179,874 RGD:6480464
G JUN Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 1 58,780,791 58,784,047 RGD:6480464
G LEP leptin JBrowse link 7 128,241,201 128,257,629 RGD:6480464
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 22 21,759,657 21,867,680 RGD:6480464
G MAPK3 mitogen-activated protein kinase 3 JBrowse link 16 30,114,105 30,123,309 RGD:6480464
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 127,735,434 127,742,951 RGD:6480464
G NFKB1 nuclear factor kappa B subunit 1 JBrowse link 4 102,501,266 102,617,302 RGD:6480464
G NFKBIA NFKB inhibitor alpha JBrowse link 14 35,401,513 35,404,749 RGD:6480464
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 226,360,691 226,408,093 RGD:6480464
G PTGER2 prostaglandin E receptor 2 JBrowse link 14 52,314,312 52,328,598 RGD:6480464
G PTGER4 prostaglandin E receptor 4 JBrowse link 5 40,679,915 40,740,936 RGD:6480464
G PTGS2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 186,671,791 186,680,423 RGD:6480464
G RELA RELA proto-oncogene, NF-kB subunit JBrowse link 11 65,653,596 65,662,972 RGD:6480464
G SP1 Sp1 transcription factor JBrowse link 12 53,380,176 53,416,446 RGD:6480464
G SRC SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 20 37,344,685 37,406,050 RGD:6480464
G TCF7 transcription factor 7 JBrowse link 5 134,114,681 134,148,229 RGD:6480464
G TCF7L2 transcription factor 7 like 2 JBrowse link 10 112,950,247 113,167,678 RGD:6480464
G TNF tumor necrosis factor JBrowse link 6 31,575,565 31,578,336 RGD:6480464
G TNFRSF1A TNF receptor superfamily member 1A JBrowse link 12 6,328,771 6,342,076 RGD:6480464
cyclopentanone term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKR1C1 aldo-keto reductase family 1 member C1 JBrowse link 10 4,963,415 4,983,283 RGD:6480464
G AKR1C2 aldo-keto reductase family 1 member C2 JBrowse link 10 4,987,775 5,018,033 RGD:6480464
G AKR1C3 aldo-keto reductase family 1 member C3 JBrowse link 10 5,048,766 5,107,686 RGD:6480464
loxoprofen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MPO myeloperoxidase JBrowse link 17 58,269,855 58,280,935 RGD:6480464
G MUC2 mucin 2, oligomeric mucus/gel-forming JBrowse link 11 1,074,875 1,110,508 RGD:6480464
G NOS2 nitric oxide synthase 2 JBrowse link 17 27,756,766 27,800,529 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 23948
    chemical entity 23911
      atom 23899
        nonmetal atom 23554
          carbon atom 23392
            organic molecular entity 23392
              aliphatic compound 14513
                alicyclic compound 1458
                  alicyclic ketone 1048
                    cyclopentanones 41
                      (+)-jasmonic acid 0
                      (4Z)-7-\{5-[([1,1'-biphenyl]-4-yl)methoxy]-2-(morpholin-4-yl)-3-oxocyclopentyl\}hept-4-enoic acid + 34
                      (9R,13R)-1a,1b-dinor-10,11-dihydro-12-oxo-15-phytoenoic acid 0
                      12-hydroxyjasmonic acid + 0
                      16,16-dimethylprostaglandin E2 8
                      cyclopentane-1,3-dione 0
                      cyclopentanone 3
                      loxoprofen + 3
                      methyl tuberonate 0
                      tuberonic acid + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 23948
    subatomic particle 23899
      composite particle 23899
        hadron 23899
          baryon 23899
            nucleon 23899
              atomic nucleus 23899
                atom 23899
                  main group element atom 23720
                    p-block element atom 23720
                      carbon group element atom 23436
                        carbon atom 23392
                          organic molecular entity 23392
                            organic group 22058
                              organic divalent group 22032
                                organodiyl group 22032
                                  carbonyl group 22007
                                    carbonyl compound 22007
                                      ketone 18073
                                        cyclic ketone 14521
                                          alicyclic ketone 1048
                                            cyclopentanones 41
                                              (+)-jasmonic acid 0
                                              (4Z)-7-\{5-[([1,1'-biphenyl]-4-yl)methoxy]-2-(morpholin-4-yl)-3-oxocyclopentyl\}hept-4-enoic acid + 34
                                              (9R,13R)-1a,1b-dinor-10,11-dihydro-12-oxo-15-phytoenoic acid 0
                                              12-hydroxyjasmonic acid + 0
                                              16,16-dimethylprostaglandin E2 8
                                              cyclopentane-1,3-dione 0
                                              cyclopentanone 3
                                              loxoprofen + 3
                                              methyl tuberonate 0
                                              tuberonic acid + 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.