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ONTOLOGY REPORT - ANNOTATIONS


Term:3,4-dihydroxybenzoic acid
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Accession:CHEBI:36062 term browser browse the term
Definition:A dihydroxybenzoic acid in which the hydroxy groups are located at positions 3 and 4.
Synonyms:related_synonym: 4,5-Dihydroxybenzoic acid;   4-Carboxy-1,2-dihydroxybenzene;   Formula=C7H6O4;   InChI=1S/C7H6O4/c8-5-2-1-4(7(10)11)3-6(5)9/h1-3,8-9H,(H,10,11);   InChIKey=YQUVCSBJEUQKSH-UHFFFAOYSA-N;   Protocatechuic acid;   Protocatehuic acid;   SMILES=C(=O)(C1=CC(=C(C=C1)O)O)O
 alt_id: CHEBI:1380;   CHEBI:16798;   CHEBI:19879;   CHEBI:20270;   CHEBI:20272;   CHEBI:41912
 xref: CAS:99-50-3 "ChemIDplus";   CAS:99-50-3 "KEGG COMPOUND";   CAS:99-50-3 "NIST Chemistry WebBook";   HMDB:HMDB0001856;   KEGG:C00230;   KNApSAcK:C00002668
 xref_mesh: MESH:C009091
 xref: MetaCyc:3-4-DIHYDROXYBENZOATE;   PDBeChem:DHB;   PMID:17709440 "Europe PMC";   PMID:19160570 "Europe PMC";   PMID:20840540 "Europe PMC";   PMID:20973550 "Europe PMC";   PMID:21569764 "Europe PMC";   PMID:21619045 "Europe PMC";   PMID:22770225 "Europe PMC";   Reaxys:1448841 "Reaxys";   Wikipedia:Protocatechuic_acid
 cyclic_relationship: is_conjugate_acid_of CHEBI:36241


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3,4-dihydroxybenzoic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1b1 aldo-keto reductase family 1 member B JBrowse link 4 61,706,866 61,720,959 RGD:6480464
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:6480464
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:6480464
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:6480464
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:6480464
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:6480464
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:6480464
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:6480464
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:6480464
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:6480464
G Eno1 enolase 1 JBrowse link 5 167,288,223 167,299,610 RGD:6480464
G Fshb follicle stimulating hormone subunit beta JBrowse link 3 98,088,321 98,092,131 RGD:6480464
G G6pd glucose-6-phosphate dehydrogenase JBrowse link X 156,274,800 156,293,935 RGD:6480464
G Glo1 glyoxalase 1 JBrowse link 20 9,273,589 9,291,608 RGD:6480464
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:6480464
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:6480464
G Ldhc lactate dehydrogenase C JBrowse link 1 102,914,875 102,931,843 RGD:6480464
G Lhb luteinizing hormone subunit beta JBrowse link 1 101,409,992 101,413,725 RGD:6480464
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:6480464
G Nfkbib NFKB inhibitor beta JBrowse link 1 86,941,073 86,948,845 RGD:6480464
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:6480464
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:6480464
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:6480464
G Sele selectin E JBrowse link 13 82,355,234 82,365,323 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:6480464
ethyl 3,4-dihydroxybenzoate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fabp4 fatty acid binding protein 4 JBrowse link 2 93,792,666 93,797,267 RGD:6480464
G Gata3 GATA binding protein 3 JBrowse link 17 72,419,752 72,452,043 RGD:6480464
G Klf2 Kruppel-like factor 2 JBrowse link 16 19,223,087 19,225,037 RGD:6480464
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:6480464
G Sp7 Sp7 transcription factor JBrowse link 7 143,957,316 143,967,488 RGD:6480464
G Taz tafazzin JBrowse link X 156,421,006 156,429,461 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19669
    role 19613
      biological role 19611
        antimicrobial agent 17151
          antimicrobial food preservative 11387
            benzoic acid 3374
              3,4-dihydroxybenzoic acid 34
                1-(3,4-dihydroxybenzoyl)-beta-D-glucopyranose + 0
                ethyl 3,4-dihydroxybenzoate 6
                methyl 3,4-dihydroxybenzoate 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19669
    subatomic particle 19665
      composite particle 19665
        hadron 19665
          baryon 19665
            nucleon 19665
              atomic nucleus 19665
                atom 19665
                  main group element atom 19545
                    p-block element atom 19545
                      carbon group element atom 19428
                        carbon atom 19420
                          organic molecular entity 19420
                            organic group 18343
                              organic divalent group 18334
                                organodiyl group 18334
                                  carbonyl group 18222
                                    carbonyl compound 18222
                                      carboxylic acid 17923
                                        aromatic carboxylic acid 10675
                                          benzoic acids 10639
                                            benzoic acid 3374
                                              hydroxybenzoic acid 2744
                                                dihydroxybenzoic acid 44
                                                  3,4-dihydroxybenzoic acid 34
                                                    1-(3,4-dihydroxybenzoyl)-beta-D-glucopyranose + 0
                                                    ethyl 3,4-dihydroxybenzoate 6
                                                    methyl 3,4-dihydroxybenzoate 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.