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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:tridecane
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Accession:CHEBI:35998 term browser browse the term
Definition:A straight chain alkane containing 13 carbon atoms. It forms a component of the essential oils isolated from plants such as Abelmoschus esculentus.
Synonyms:related_synonym: CH3-[CH2]11-CH3;   Formula=C13H28;   InChI=1S/C13H28/c1-3-5-7-9-11-13-12-10-8-6-4-2/h3-13H2,1-2H3;   InChIKey=IIYFAKIEWZDVMP-UHFFFAOYSA-N;   SMILES=CCCCCCCCCCCCC;   Tridekan;   n-tridecane
 alt_id: CHEBI:32901;   CHEBI:35025;   CHEBI:46104
 xref: Beilstein:1733089;   CAS:629-50-5;   Gmelin:1222217;   HMDB:HMDB0034284;   KEGG:C13834;   LIPID_MAPS_instance:LMFA11000001
 xref_mesh: MESH:C094074
 xref: PDBeChem:TRD;   PMID:23768323;   PMID:24010324;   Reaxys:1733089;   Wikipedia:Tridecane


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tridecane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1a interleukin 1 alpha multiple interactions ISO tridecane results in increased expression of and results in increased secretion of IL1A protein CTD PMID:19720135 NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822 		JBrowse link
G Il6 interleukin 6 multiple interactions ISO tridecane results in increased expression of and results in increased secretion of IL6 protein CTD PMID:19720135 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19831
    role 19807
      biological role 19805
        biochemical role 19515
          volatile oil component 7625
            tridecane 2
              12-methyltridecan-1-ol 0
              2-methyltridecane 0
              tridecan-2-one 0
              tridecanal 0
              tridecanol + 0
              tridecyl group 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19831
    subatomic particle 19829
      composite particle 19829
        hadron 19829
          baryon 19829
            nucleon 19829
              atomic nucleus 19829
                atom 19829
                  main group element atom 19779
                    main group molecular entity 19779
                      s-block molecular entity 19617
                        hydrogen molecular entity 19604
                          hydrides 19102
                            organic hydride 18674
                              organic fundamental parent 18674
                                hydrocarbon 18410
                                  alkane 14169
                                    long-chain alkane 601
                                      tridecane 2
                                        12-methyltridecan-1-ol 0
                                        2-methyltridecane 0
                                        tridecan-2-one 0
                                        tridecanal 0
                                        tridecanol + 0
                                        tridecyl group 0
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