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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:tridecane
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Accession:CHEBI:35998 term browser browse the term
Definition:A straight chain alkane containing 13 carbon atoms. It forms a component of the essential oils isolated from plants such as Abelmoschus esculentus.
Synonyms:related_synonym: CH3-[CH2]11-CH3;   Formula=C13H28;   InChI=1S/C13H28/c1-3-5-7-9-11-13-12-10-8-6-4-2/h3-13H2,1-2H3;   InChIKey=IIYFAKIEWZDVMP-UHFFFAOYSA-N;   SMILES=CCCCCCCCCCCCC;   Tridekan;   n-tridecane
 alt_id: CHEBI:32901;   CHEBI:35025;   CHEBI:46104
 xref: Beilstein:1733089;   CAS:629-50-5;   Gmelin:1222217;   HMDB:HMDB0034284;   KEGG:C13834;   LIPID_MAPS_instance:LMFA11000001
 xref_mesh: MESH:C094074
 xref: PDBeChem:TRD;   PMID:23768323;   PMID:24010324;   Reaxys:1733089;   Wikipedia:Tridecane



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tridecane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1a interleukin 1 alpha multiple interactions ISO tridecane results in increased expression of and results in increased secretion of IL1A protein CTD PMID:19720135 NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822
JBrowse link
G Il6 interleukin 6 multiple interactions ISO tridecane results in increased expression of and results in increased secretion of IL6 protein CTD PMID:19720135 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19800
    role 19751
      biological role 19751
        biochemical role 19368
          volatile oil component 6580
            tridecane 2
              12-methyltridecan-1-ol 0
              2-methyltridecane 0
              7-tridecanol 0
              tridecan-2-one 0
              tridecanal 0
              tridecyl group 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19800
    subatomic particle 19799
      composite particle 19799
        hadron 19799
          baryon 19799
            nucleon 19799
              atomic nucleus 19799
                atom 19799
                  main group element atom 19698
                    main group molecular entity 19698
                      s-block molecular entity 19479
                        hydrogen molecular entity 19471
                          hydrides 18834
                            organic hydride 18348
                              organic fundamental parent 18348
                                hydrocarbon 18059
                                  alkane 13797
                                    long-chain alkane 459
                                      tridecane 2
                                        12-methyltridecan-1-ol 0
                                        2-methyltridecane 0
                                        7-tridecanol 0
                                        tridecan-2-one 0
                                        tridecanal 0
                                        tridecyl group 0
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