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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:tridecane
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Accession:CHEBI:35998 term browser browse the term
Definition:A straight chain alkane containing 13 carbon atoms. It forms a component of the essential oils isolated from plants such as Abelmoschus esculentus.
Synonyms:related_synonym: CH3-[CH2]11-CH3;   Formula=C13H28;   InChI=1S/C13H28/c1-3-5-7-9-11-13-12-10-8-6-4-2/h3-13H2,1-2H3;   InChIKey=IIYFAKIEWZDVMP-UHFFFAOYSA-N;   SMILES=CCCCCCCCCCCCC;   Tridekan;   n-tridecane
 alt_id: CHEBI:32901;   CHEBI:35025;   CHEBI:46104
 xref: Beilstein:1733089;   CAS:629-50-5;   Gmelin:1222217;   HMDB:HMDB0034284;   KEGG:C13834;   LIPID_MAPS_instance:LMFA11000001
 xref_mesh: MESH:C094074
 xref: PDBeChem:TRD;   PMID:23768323;   PMID:24010324;   Reaxys:1733089;   Wikipedia:Tridecane


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tridecane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1a interleukin 1 alpha multiple interactions ISO tridecane results in increased expression of and results in increased secretion of IL1A protein CTD PMID:19720135 NCBI chr 3:121,824,712...121,836,122
Ensembl chr 3:121,825,412...121,836,086
JBrowse link
G Il6 interleukin 6 multiple interactions ISO tridecane results in increased expression of and results in increased secretion of IL6 protein CTD PMID:19720135 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19785
    role 19732
      biological role 19732
        biochemical role 19281
          volatile oil component 5977
            tridecane 2
              12-methyltridecan-1-ol 0
              2-methyltridecane 0
              7-tridecanol 0
              tridecan-2-one 0
              tridecyl group 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19785
    subatomic particle 19782
      composite particle 19782
        hadron 19782
          baryon 19782
            nucleon 19782
              atomic nucleus 19782
                atom 19782
                  main group element atom 19670
                    main group molecular entity 19670
                      s-block molecular entity 19428
                        hydrogen molecular entity 19418
                          hydrides 18685
                            organic hydride 18248
                              organic fundamental parent 18248
                                hydrocarbon 17968
                                  alkane 13683
                                    long-chain alkane 415
                                      tridecane 2
                                        12-methyltridecan-1-ol 0
                                        2-methyltridecane 0
                                        7-tridecanol 0
                                        tridecan-2-one 0
                                        tridecyl group 0
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