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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:sorbic acid
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Accession:CHEBI:35962 term browser browse the term
Definition:A hexadienoic acid with double bonds at C-2 and C-4; it has four geometrical isomers, of which the trans,trans-form is naturally occurring.
Synonyms:exact_synonym: hexa-2,4-dienoic acid
 related_synonym: (2-butenylidene) acetic acid;   2,4-Hexadiensaeure;   2,4-SA;   2,4-hexadienoic acid;   2-propenylacrylic acid;   Formula=C6H8O2;   InChI=1S/C6H8O2/c1-2-3-4-5-6(7)8/h2-5H,1H3,(H,7,8);   InChIKey=WSWCOQWTEOXDQX-UHFFFAOYSA-N;   SA;   SMILES=[H]C(C)=CC([H])=CC(O)=O;   Sorbinsaeure;   crotylidene acetic acid
 xref: Beilstein:1741831;   CAS:22500-92-1;   PMID:11206806
 cyclic_relationship: is_conjugate_acid_of CHEBI:36550



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(2E,4E)-hexa-2,4-dienoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fosl1 FOS like 1, AP-1 transcription factor subunit increases expression ISO Sorbic Acid results in increased expression of FOSL1 protein CTD PMID:20025956 NCBI chr 1:202,754,549...202,763,057
Ensembl chr 1:202,754,529...202,764,930
JBrowse link
G Ifng interferon gamma multiple interactions EXP [Food Preservatives results in increased abundance of Sorbic Acid] which results in increased expression of IFNG mRNA CTD PMID:32179172 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
JBrowse link
G Il10 interleukin 10 multiple interactions EXP [Food Preservatives results in increased abundance of Sorbic Acid] which results in increased expression of IL10 mRNA CTD PMID:32179172 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il1b interleukin 1 beta multiple interactions EXP [Food Preservatives results in increased abundance of Sorbic Acid] which results in increased expression of IL1B mRNA CTD PMID:32179172 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Il6 interleukin 6 multiple interactions EXP [Food Preservatives results in increased abundance of Sorbic Acid] which results in increased expression of IL6 mRNA CTD PMID:32179172 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Orm1 orosomucoid 1 increases expression ISO Sorbic Acid results in increased expression of ORM1 protein CTD PMID:20025956 NCBI chr 5:76,766,637...76,776,149
Ensembl chr 5:76,772,941...76,776,154
JBrowse link
G Phex phosphate regulating endopeptidase homolog, X-linked increases expression ISO Sorbic Acid results in increased expression of PHEX protein CTD PMID:20025956 NCBI chr  X:37,607,553...37,856,183
Ensembl chr  X:37,610,760...37,854,469
JBrowse link
G Rad51ap1 RAD51 associated protein 1 increases expression ISO Sorbic Acid results in increased expression of RAD51AP1 protein CTD PMID:20025956 NCBI chr 4:159,759,454...159,772,524
Ensembl chr 4:159,759,459...159,772,524
JBrowse link
G Tnf tumor necrosis factor multiple interactions EXP [Food Preservatives results in increased abundance of Sorbic Acid] which results in increased expression of TNF mRNA CTD PMID:32179172 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Vegfa vascular endothelial growth factor A increases expression ISO Sorbic Acid results in increased expression of VEGFA protein CTD PMID:20025956 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19800
    chemical entity 19800
      atom 19799
        nonmetal atom 19686
          carbon atom 19609
            organic molecular entity 19609
              lipid 17493
                fatty acid 16011
                  medium-chain fatty acid 3557
                    sorbic acid 10
                      (2E,4E)-hexa-2,4-dienoic acid + 10
                      (2E,4Z)-6-(4-chlorophenyl)-2-hydroxy-6-oxohexa-2,4-dienoic acid 0
                      (2E,4Z)-hexa-2,4-dienoic acid 0
                      (2Z,4E)-hexa-2,4-dienoic acid 0
                      (2Z,4Z)-hexa-2,4-dienoic acid 0
                      2-Hydroxy-6-oxo-(2'-aminophenyl)-hexa-2,4-dienoate 0
                      2-hydroxy-6-(2-hydroxyphenoxy)-6-oxo-cis,cis-hexa-2,4-dienoic acid 0
                      2-hydroxy-6-(2-hydroxyphenyl)-6-oxo-cis,cis-hexa-2,4-dienoic acid 0
                      2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid 0
                      ethyl sorbate 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19800
    subatomic particle 19799
      composite particle 19799
        hadron 19799
          baryon 19799
            nucleon 19799
              atomic nucleus 19799
                atom 19799
                  main group element atom 19698
                    p-block element atom 19698
                      carbon group element atom 19619
                        carbon atom 19609
                          organic molecular entity 19609
                            organic group 18718
                              organic divalent group 18702
                                organodiyl group 18702
                                  carbonyl group 18651
                                    carbonyl compound 18651
                                      carboxylic acid 18346
                                        monocarboxylic acid 17622
                                          fatty acid 16011
                                            unsaturated fatty acid 957
                                              polyunsaturated fatty acid 692
                                                hexadienoic acid 10
                                                  sorbic acid 10
                                                    (2E,4E)-hexa-2,4-dienoic acid + 10
                                                    (2E,4Z)-6-(4-chlorophenyl)-2-hydroxy-6-oxohexa-2,4-dienoic acid 0
                                                    (2E,4Z)-hexa-2,4-dienoic acid 0
                                                    (2Z,4E)-hexa-2,4-dienoic acid 0
                                                    (2Z,4Z)-hexa-2,4-dienoic acid 0
                                                    2-Hydroxy-6-oxo-(2'-aminophenyl)-hexa-2,4-dienoate 0
                                                    2-hydroxy-6-(2-hydroxyphenoxy)-6-oxo-cis,cis-hexa-2,4-dienoic acid 0
                                                    2-hydroxy-6-(2-hydroxyphenyl)-6-oxo-cis,cis-hexa-2,4-dienoic acid 0
                                                    2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid 0
                                                    ethyl sorbate 0
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