Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:phosphorus hydride
go back to main search page
Accession:CHEBI:35879 term browser browse the term
Synonyms:related_synonym: phosphorus hydrides


show annotations for term's descendants           Sort by:
phosphane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb10 ATP binding cassette subfamily B member 10 increases expression EXP phosphine results in increased expression of ABCB10 mRNA CTD PMID:34427094 NCBI chr19:68,850,108...68,881,689
Ensembl chr19:51,952,681...51,982,753 		JBrowse link
G Agtr1a angiotensin II receptor, type 1a increases expression EXP phosphine results in increased expression of AGTR1 mRNA CTD PMID:34427094 NCBI chr17:34,383,397...34,435,523
Ensembl chr17:34,174,429...34,226,946 		JBrowse link
G Aplnr apelin receptor decreases expression EXP phosphine results in decreased expression of APLNR mRNA CTD PMID:34427094 NCBI chr 3:90,624,055...90,627,700
Ensembl chr 3:70,217,385...70,221,050 		JBrowse link
G Bmp6 bone morphogenetic protein 6 affects expression EXP phosphine affects the expression of BMP6 mRNA CTD PMID:34427094 NCBI chr17:26,523,704...26,785,558
Ensembl chr17:26,318,569...26,470,365 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A increases expression EXP phosphine results in increased expression of BMPR1A mRNA CTD PMID:34427094 NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Cbl Cbl proto-oncogene affects expression EXP phosphine affects the expression of CBL mRNA CTD PMID:34427094 NCBI chr 8:53,384,656...53,468,067
Ensembl chr 8:44,489,410...44,571,176 		JBrowse link
G Ccn2 cellular communication network factor 2 increases expression EXP phosphine results in increased expression of CTGF mRNA CTD PMID:34427094 NCBI chr 1:22,621,498...22,624,614
Ensembl chr 1:20,802,199...20,805,734 		JBrowse link
G Ciao2b cytosolic iron-sulfur assembly component 2B increases expression EXP phosphine results in increased expression of CIAO2B mRNA CTD PMID:34427094 NCBI chr19:344,194...346,068
Ensembl chr19:344,203...346,068 		JBrowse link
G Cp ceruloplasmin increases expression EXP phosphine results in increased expression of CP mRNA CTD PMID:34427094 NCBI chr 2:104,368,336...104,427,119
Ensembl chr 2:102,439,624...102,498,075 		JBrowse link
G Epas1 endothelial PAS domain protein 1 increases expression EXP phosphine results in increased expression of EPAS1 mRNA CTD PMID:34427094 NCBI chr 6:13,543,252...13,626,147
Ensembl chr 6:7,790,647...7,871,228 		JBrowse link
G Epor erythropoietin receptor affects expression EXP phosphine affects the expression of EPOR mRNA CTD PMID:34427094 NCBI chr 8:28,765,738...28,770,371
Ensembl chr 8:20,489,678...20,494,257 		JBrowse link
G Grb2 growth factor receptor bound protein 2 decreases expression EXP phosphine results in decreased expression of GRB2 mRNA CTD PMID:34427094 NCBI chr10:101,380,354...101,448,138
Ensembl chr10:100,869,718...100,949,309 		JBrowse link
G Hmox1 heme oxygenase 1 increases expression EXP phosphine results in increased expression of HMOX1 mRNA CTD PMID:34427094 NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,467,244...13,474,079 		JBrowse link
G Hscb HscB mitochondrial iron-sulfur cluster co-chaperone increases expression EXP phosphine results in increased expression of HSCB mRNA CTD PMID:34427094 NCBI chr12:51,481,318...51,491,689
Ensembl chr12:45,821,555...45,831,909 		JBrowse link
G Ireb2 iron responsive element binding protein 2 affects expression EXP phosphine affects the expression of IREB2 mRNA CTD PMID:34427094 NCBI chr 8:64,124,152...64,207,702
Ensembl chr 8:55,228,085...55,311,611 		JBrowse link
G Jak2 Janus kinase 2 decreases expression EXP phosphine results in decreased expression of JAK2 mRNA CTD PMID:34427094 NCBI chr 1:236,408,905...236,468,769
Ensembl chr 1:226,995,334...227,054,189 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit increases expression EXP phosphine results in increased expression of JUN mRNA CTD PMID:34427094 NCBI chr 5:115,009,900...115,012,993
Ensembl chr 5:109,893,145...109,897,656 		JBrowse link
G Lyrm4 LYR motif containing 4 increases expression EXP phosphine results in increased expression of LYRM4 mRNA CTD PMID:34427094 NCBI chr17:28,951,912...29,067,300
Ensembl chr17:28,746,469...28,861,750 		JBrowse link
G Nos3 nitric oxide synthase 3 increases expression EXP phosphine results in increased expression of NOS3 mRNA CTD PMID:34427094 NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:10,793,834...10,814,166 		JBrowse link
G Pcbp1 poly(rC) binding protein 1 affects expression EXP phosphine affects the expression of PCBP1 mRNA CTD PMID:34427094 NCBI chr 4:120,530,100...120,532,107
Ensembl chr 4:118,972,661...118,976,500 		JBrowse link
G Pdk1 pyruvate dehydrogenase kinase 1 affects expression EXP phosphine affects the expression of PDK1 mRNA CTD PMID:34427094 NCBI chr 3:77,113,464...77,144,145
Ensembl chr 3:56,705,871...56,733,038 		JBrowse link
G Serpine1 serpin family E member 1 increases expression EXP phosphine results in increased expression of SERPINE1 mRNA CTD PMID:34427094 NCBI chr12:25,237,977...25,248,356
Ensembl chr12:19,601,272...19,611,657 		JBrowse link
G Slc25a37 solute carrier family 25 member 37 increases expression EXP phosphine results in increased expression of SLC25A37 mRNA CTD PMID:34427094 NCBI chr15:50,944,085...50,986,506
Ensembl chr15:44,536,727...44,577,199 		JBrowse link
G Smad4 SMAD family member 4 increases expression EXP phosphine results in increased expression of SMAD4 mRNA CTD PMID:34427094 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 increases expression EXP phosphine results in increased expression of SOCS1 mRNA CTD PMID:34427094 NCBI chr10:5,389,574...5,391,265
Ensembl chr10:4,882,560...4,884,383 		JBrowse link
G Socs3 suppressor of cytokine signaling 3 increases expression EXP phosphine results in increased expression of SOCS3 mRNA CTD PMID:34427094 NCBI chr10:103,692,579...103,695,975
Ensembl chr10:103,193,537...103,197,787 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase increases expression EXP phosphine results in increased expression of SRC mRNA CTD PMID:34427094 NCBI chr 3:166,511,616...166,559,463
Ensembl chr 3:146,091,841...146,139,476 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A decreases expression EXP phosphine results in decreased expression of STAT5 mRNA CTD PMID:34427094 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866 		JBrowse link
G Tfrc transferrin receptor increases expression EXP phosphine results in increased expression of TFRC mRNA CTD PMID:34427094 NCBI chr11:81,668,478...81,690,318
Ensembl chr11:68,163,413...68,185,257 		JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 decreases expression EXP phosphine results in decreased expression of TWSG1 mRNA CTD PMID:34427094 NCBI chr 9:112,979,972...113,014,315
Ensembl chr 9:105,533,136...105,567,479 		JBrowse link
TCEP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G As3mt arsenite methyltransferase multiple interactions
affects folding
increases reduction		 EXP
ISO		 tris(2-carboxyethyl)phosphine promotes the reaction [AS3MT protein results in increased methylation of Arsenic]
tris(2-carboxyethyl)phosphine promotes the reaction [AS3MT protein binds to and results in increased methylation of arsenite]; tris(2-carboxyethyl)phosphine promotes the reaction [AS3MT protein binds to S-Adenosylmethionine]; tris(2-carboxyethyl)phosphine promotes the reaction [AS3MT protein results in increased chemical synthesis of dimethylarsinous acid]; tris(2-carboxyethyl)phosphine promotes the reaction [AS3MT protein results in increased chemical synthesis of methylarsonite]; tris(2-carboxyethyl)phosphine promotes the reaction [AS3MT protein results in increased methylation of arsenite]
tris(2-carboxyethyl)phosphine affects the folding of AS3MT protein
tris(2-carboxyethyl)phosphine results in increased reduction of AS3MT protein		 CTD PMID:15025511 PMID:22955273 PMID:25349987 NCBI chr 1:245,595,939...245,628,921
Ensembl chr 1:245,596,108...245,627,872 		JBrowse link
G Crygd crystallin, gamma D decreases oxidation ISO [tris(2-carboxyethyl)phosphine results in decreased oxidation of CRYGD protein] which results in decreased oxidation of CRYGD mRNA mutant form; tris(2-carboxyethyl)phosphine results in decreased oxidation of CRYGD protein CTD PMID:30242128 NCBI chr 9:66,442,057...66,443,668
Ensembl chr 9:66,442,054...66,444,067 		JBrowse link
G Mtf1 metal-regulatory transcription factor 1 multiple interactions ISO tris(2-carboxyethyl)phosphine inhibits the reaction [Cadmium promotes the reaction [MTF1 protein binds to MTF1 protein]]; tris(2-carboxyethyl)phosphine inhibits the reaction [Copper promotes the reaction [MTF1 protein binds to MTF1 protein]] CTD PMID:22057392 NCBI chr 5:142,347,024...142,391,810
Ensembl chr 5:137,062,376...137,107,136 		JBrowse link
G Neil1 nei-like DNA glycosylase 1 multiple interactions ISO [tris(2-carboxyethyl)phosphine co-treated with Edetic Acid] inhibits the reaction [Copper results in decreased activity of NEIL1 protein]; tris(2-carboxyethyl)phosphine inhibits the reaction [Hydrogen Peroxide results in decreased activity of NEIL1 protein] CTD PMID:20622253 NCBI chr 8:57,550,142...57,556,884
Ensembl chr 8:57,550,147...57,556,258 		JBrowse link
G Slc34a1 solute carrier family 34 member 1 decreases activity EXP tris(2-carboxyethyl)phosphine results in decreased activity of SLC34A1 protein CTD PMID:10926679 NCBI chr17:9,224,010...9,238,983
Ensembl chr17:9,218,876...9,233,852 		JBrowse link
G Txn1 thioredoxin 1 multiple interactions ISO tris(2-carboxyethyl)phosphine inhibits the reaction [chromium hexavalent ion results in increased oxidation of TXN protein]; tris(2-carboxyethyl)phosphine inhibits the reaction [sodium chromate(VI) results in increased oxidation of TXN protein] CTD PMID:19135121 PMID:19703554 NCBI chr 5:77,507,455...77,519,685
Ensembl chr 5:72,711,933...72,724,629 		JBrowse link
G Txn2 thioredoxin 2 multiple interactions ISO tris(2-carboxyethyl)phosphine inhibits the reaction [chromium hexavalent ion results in increased oxidation of TXN2 protein] CTD PMID:19703554 NCBI chr 7:111,377,338...111,390,940
Ensembl chr 7:109,496,761...109,510,359 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19887
    chemical entity 19885
      molecular entity 19884
        inorganic molecular entity 19672
          inorganic hydride 18162
            pnictogen hydride 18152
              phosphorus hydride 37
                hydridophosphate(1-) 0
                hydridophosphorus(.) (triplet) 0
                hydridophosphorus(1+) 0
                hydridophosphorus(2+) 0
                phosphanediide 0
                phosphanes + 37
                phosphanide 0
                phosphanuide 0
                phosphanyl 0
                phosphanylium 0
                phosphonium + 0
                phosphorane + 0
                trihydridophosphate(.1-) 0
                trihydridophosphorus(.1+) 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19887
    subatomic particle 19885
      composite particle 19885
        hadron 19885
          baryon 19885
            nucleon 19885
              atomic nucleus 19885
                atom 19885
                  main group element atom 19824
                    main group molecular entity 19824
                      s-block molecular entity 19658
                        hydrogen molecular entity 19640
                          hydrides 19145
                            inorganic hydride 18162
                              pnictogen hydride 18152
                                phosphorus hydride 37
                                  hydridophosphate(1-) 0
                                  hydridophosphorus(.) (triplet) 0
                                  hydridophosphorus(1+) 0
                                  hydridophosphorus(2+) 0
                                  phosphanediide 0
                                  phosphanes + 37
                                  phosphanide 0
                                  phosphanuide 0
                                  phosphanyl 0
                                  phosphanylium 0
                                  phosphonium + 0
                                  phosphorane + 0
                                  trihydridophosphate(.1-) 0
                                  trihydridophosphorus(.1+) 0
paths to the root