Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:indole
go back to main search page
Accession:CHEBI:35581 term browser browse the term
Definition:Either of two isomeric forms comprising a benzene ring fused to a pyrrole ring.
Synonyms:related_synonym: Formula=C8H7N
 xref: HMDB:HMDB0000738;   PMID:24563545;   PMID:24695245;   Wikipedia:Indole


show annotations for term's descendants       view all columns           Sort by:
 
1H-indole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahr aryl hydrocarbon receptor JBrowse link 6 54,963,990 55,001,806 RGD:6480464
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link 2 196,594,178 196,651,486 RGD:6480464
G Epo erythropoietin JBrowse link 12 22,274,828 22,278,268 RGD:6480464
G Mc1r melanocortin 1 receptor JBrowse link 19 56,215,420 56,219,987 RGD:6480464
G Mc3r melanocortin 3 receptor JBrowse link 3 170,252,901 170,253,998 RGD:6480464
G Mc4r melanocortin 4 receptor JBrowse link 18 62,612,838 62,614,725 RGD:6480464
G Mc5r melanocortin 5 receptor JBrowse link 18 64,113,659 64,118,700 RGD:6480464
2-methyl-1H-indole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:6480464
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19778
    chemical entity 19777
      molecular entity 19775
        mancude ring 8122
          organic mancude parent 8122
            mancude organic heterocyclic parent 8122
              mancude organic heterobicyclic parent 5198
                indole 9
                  1H-indole + 9
                  3-geranyl-3-[(Z)-2-isocyanovinyl]-3H-indole 0
                  3H-indole + 0
                  indolyl group + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19778
    subatomic particle 19776
      composite particle 19776
        hadron 19776
          baryon 19776
            nucleon 19776
              atomic nucleus 19776
                atom 19776
                  main group element atom 19662
                    p-block element atom 19662
                      carbon group element atom 19556
                        carbon atom 19545
                          organic molecular entity 19545
                            organic molecule 19469
                              organic cyclic compound 19229
                                organic heterocyclic compound 18346
                                  organic heteropolycyclic compound 17698
                                    organic heterobicyclic compound 16478
                                      benzopyrrole 9338
                                        indoles 9193
                                          indole 9
                                            1H-indole + 9
                                            3-geranyl-3-[(Z)-2-isocyanovinyl]-3H-indole 0
                                            3H-indole + 0
                                            indolyl group + 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.