Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:prostaglandin D3
go back to main search page
Accession:CHEBI:34939 term browser browse the term
Definition:A member of the class of prostaglandins D that is prosta-5,13,17-trien-1-oic acid substituted by hydroxy groups at positions 9 and 15 and an oxo group at position 11 (the 5Z,13E,15S,17Z-stereoisomer).
Synonyms:related_synonym: (5Z)-7-[(1R,2R,5S)-5-hydroxy-2-[(1E,3S,5Z)-3-hydroxyocta-1,5-dien-1-yl]-3-oxocyclopentyl]hept-5-enoic acid;   (5Z,13E,15S,17Z)-9alpha,15-dihydroxy-11-oxoprosta-5,13,17-trien-1-oic acid;   9S,15S-Dihydroxy-11-oxo-5Z,13E,17Z-prostatrienoic acid;   Formula=C20H30O5;   InChI=1S/C20H30O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h3-4,6-7,12-13,15-18,21-22H,2,5,8-11,14H2,1H3,(H,24,25)/b6-3-,7-4-,13-12+/t15-,16+,17+,18-/m0/s1;   InChIKey=ANOICLBSJIMQTA-WXGBOJPQSA-N;   SMILES=CC\\C=C/C[C@H](O)\\C=C\\[C@@H]1[C@@H](C\\C=C/CCCC(O)=O)[C@@H](O)CC1=O
 xref: CAS:71902-47-1;   HMDB:HMDB0003034;   KEGG:C13802;   LIPID_MAPS_instance:LMFA03010142
 xref_mesh: MESH:C027005
 xref: PMID:230492;   PMID:23595524;   PMID:23833568;   Reaxys:5995201
 cyclic_relationship: is_conjugate_acid_of CHEBI:132149


show annotations for term's descendants       view all columns           Sort by:
 
prostaglandin D3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il1b interleukin 1 beta JBrowse link 2 129,364,569 129,371,164 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 150,100,031 150,108,234 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 21322
    role 21309
      biological role 21307
        biochemical role 20367
          metabolite 20307
            eukaryotic metabolite 20140
              animal metabolite 19548
                mammalian metabolite 19457
                  human metabolite 18928
                    prostaglandin D3 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 21322
    subatomic particle 21318
      composite particle 21318
        hadron 21318
          baryon 21318
            nucleon 21318
              atomic nucleus 21318
                atom 21318
                  main group element atom 21193
                    p-block element atom 21193
                      carbon group element atom 20991
                        carbon atom 20881
                          organic molecular entity 20881
                            organic group 19225
                              organic divalent group 19215
                                organodiyl group 19215
                                  carbonyl group 19189
                                    carbonyl compound 19189
                                      carboxylic acid 18870
                                        monocarboxylic acid 18021
                                          fatty acid 16431
                                            fatty acid derivative 1016
                                              icosanoid 456
                                                prostanoid 397
                                                  prostaglandin 392
                                                    prostaglandins D 141
                                                      prostaglandin D3 2
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.