Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:tungsten molecular entity
go back to main search page
Accession:CHEBI:33742 term browser browse the term
Synonyms:related_synonym: tungsten compounds;   tungsten molecular entities

show annotations for term's descendants           Sort by:
 
sodium tungstate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 thymoma viral proto-oncogene 2 affects expression ISO sodium tungstate(VI) affects the expression of AKT2 mRNA CTD PMID:26164860 NCBI chr 7:27,591,552...27,640,826
Ensembl chr 7:27,591,552...27,640,826 		JBrowse link
G Ccn2 cellular communication network factor 2 decreases expression ISO sodium tungstate(VI) results in decreased expression of CCN2 mRNA CTD PMID:26164860 NCBI chr10:24,595,442...24,598,683
Ensembl chr10:24,595,442...24,598,683 		JBrowse link
G Cd74 CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated) increases expression ISO sodium tungstate(VI) results in increased expression of CD74 mRNA CTD PMID:26164860 NCBI chr18:60,803,849...60,812,652
Ensembl chr18:60,803,848...60,812,652 		JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A (P21) decreases expression ISO sodium tungstate(VI) results in decreased expression of CDKN1A mRNA CTD PMID:26164860 NCBI chr17:29,090,979...29,100,722
Ensembl chr17:29,090,976...29,100,727 		JBrowse link
G Cryab crystallin, alpha B increases expression ISO sodium tungstate(VI) results in increased expression of CRYAB mRNA CTD PMID:26164860 NCBI chr 9:50,745,951...50,756,636
Ensembl chr 9:50,751,325...50,756,636 		JBrowse link
G Csf3 colony stimulating factor 3 (granulocyte) increases expression ISO sodium tungstate(VI) results in increased expression of CSF3 mRNA CTD PMID:26164860 NCBI chr11:98,700,183...98,703,631
Ensembl chr11:98,701,263...98,703,629 		JBrowse link
G Egr1 early growth response 1 increases expression ISO sodium tungstate(VI) results in increased expression of EGR1 mRNA CTD PMID:24619124 NCBI chr18:34,861,207...34,864,956
Ensembl chr18:34,859,823...34,864,984 		JBrowse link
G Fbxw5 F-box and WD-40 domain protein 5 decreases expression ISO sodium tungstate(VI) results in decreased expression of FBXW5 mRNA CTD PMID:24619124 NCBI chr 2:25,500,750...25,505,470
Ensembl chr 2:25,500,750...25,505,471 		JBrowse link
G Fn3k fructosamine 3 kinase increases expression ISO sodium tungstate(VI) results in increased expression of FN3K mRNA CTD PMID:24619124 NCBI chr11:121,434,953...121,450,490
Ensembl chr11:121,434,913...121,450,491 		JBrowse link
G Gpt glutamic pyruvic transaminase, soluble multiple interactions ISO sodium tungstate(VI) inhibits the reaction [Streptozocin results in increased activity of GPT protein] CTD PMID:11357483 NCBI chr15:76,696,726...76,699,675
Ensembl chr15:76,695,716...76,699,686 		JBrowse link
G Hoxb5 homeobox B5 decreases expression ISO sodium tungstate(VI) results in decreased expression of HOXB5 mRNA CTD PMID:26164860 NCBI chr11:96,303,512...96,306,121
Ensembl chr11:96,303,336...96,306,121 		JBrowse link
G Htatip2 HIV-1 Tat interactive protein 2 increases expression ISO sodium tungstate(VI) results in increased expression of HTATIP2 mRNA CTD PMID:26164860 NCBI chr 7:49,759,045...49,774,000
Ensembl chr 7:49,759,115...49,773,975 		JBrowse link
G Igfbp2 insulin-like growth factor binding protein 2 affects expression ISO sodium tungstate(VI) affects the expression of IGFBP2 mRNA CTD PMID:26164860 NCBI chr 1:72,824,480...72,852,474
Ensembl chr 1:72,824,503...72,852,474 		JBrowse link
G Nmt2 N-myristoyltransferase 2 increases expression ISO sodium tungstate(VI) results in increased expression of NMT2 mRNA CTD PMID:24619124 NCBI chr 2:3,284,212...3,328,877
Ensembl chr 2:3,284,212...3,328,877 		JBrowse link
G Nqo1 NAD(P)H dehydrogenase, quinone 1 increases expression ISO sodium tungstate(VI) results in increased expression of NQO1 mRNA CTD PMID:26164860 NCBI chr 8:107,388,225...107,403,205
Ensembl chr 8:107,388,225...107,403,206 		JBrowse link
G S100a4 S100 calcium binding protein A4 increases expression ISO sodium tungstate(VI) results in increased expression of S100A4 mRNA CTD PMID:26164860 NCBI chr 3:90,603,770...90,606,045
Ensembl chr 3:90,603,771...90,606,045 		JBrowse link
G Skp2 S-phase kinase-associated protein 2 increases expression ISO sodium tungstate(VI) results in increased expression of SKP2 mRNA CTD PMID:26164860 NCBI chr15:9,111,982...9,155,425
Ensembl chr15:9,111,985...9,155,425 		JBrowse link
G Stk26 serine/threonine kinase 26 increases expression ISO sodium tungstate(VI) results in increased expression of STK26 mRNA CTD PMID:26164860 NCBI chr  X:50,841,174...50,893,103
Ensembl chr  X:50,841,047...50,893,097 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 decreases expression ISO sodium tungstate(VI) results in decreased expression of TGFB1 mRNA CTD PMID:26164860 NCBI chr 7:25,687,002...25,705,077
Ensembl chr 7:25,687,002...25,705,077 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 affects expression ISO sodium tungstate(VI) affects the expression of TGFB2 mRNA CTD PMID:26164860 NCBI chr 1:186,622,787...186,709,697
Ensembl chr 1:186,622,792...186,705,989 		JBrowse link
G Xdh xanthine dehydrogenase multiple interactions ISO sodium tungstate(VI) inhibits the reaction [Carbon Tetrachloride results in increased activity of XDH protein] CTD PMID:17727797 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196 		JBrowse link
tungstate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aox1 aldehyde oxidase 1 decreases expression
multiple interactions		 EXP tungstate results in decreased expression of AOX1 protein
tungstate inhibits the reaction [Tetrachlorodibenzodioxin results in increased expression of AOX1 protein]		 CTD PMID:15664268 NCBI chr 1:58,029,809...58,106,410
Ensembl chr 1:58,029,931...58,106,413 		JBrowse link
G Aox3 aldehyde oxidase 3 multiple interactions
decreases expression		 EXP tungstate inhibits the reaction [Tetrachlorodibenzodioxin results in increased expression of AOX3 protein]
tungstate results in decreased expression of AOX3 protein		 CTD PMID:15664268 NCBI chr 1:58,113,135...58,202,221
Ensembl chr 1:58,113,130...58,200,698 		JBrowse link
G Car1 carbonic anhydrase 1 decreases activity ISO tungstate results in decreased activity of CA1 protein CTD PMID:15664814 NCBI chr 3:14,766,214...14,808,365
Ensembl chr 3:14,766,216...14,808,368 		JBrowse link
G Car2 carbonic anhydrase 2 decreases activity ISO tungstate results in decreased activity of CA2 protein CTD PMID:15664814 NCBI chr 3:14,886,269...14,900,770
Ensembl chr 3:14,886,273...14,900,770 		JBrowse link
G Car4 carbonic anhydrase 4 decreases activity ISO tungstate results in decreased activity of CA4 protein CTD PMID:15664814 NCBI chr11:84,957,754...84,966,054
Ensembl chr11:84,957,786...84,966,044 		JBrowse link
G Car5a carbonic anhydrase 5a, mitochondrial decreases activity ISO tungstate results in decreased activity of CA5A protein CTD PMID:15664814 NCBI chr 8:121,916,135...121,944,912
Ensembl chr 8:121,916,126...121,944,904 		JBrowse link
G Car9 carbonic anhydrase 9 decreases activity ISO tungstate results in decreased activity of CA9 protein CTD PMID:15664814 NCBI chr 4:43,507,026...43,513,729
Ensembl chr 4:43,506,966...43,513,729 		JBrowse link
G G6pc glucose-6-phosphatase, catalytic multiple interactions ISO tungstate inhibits the reaction [Glucose results in increased activity of G6PC1 protein] CTD PMID:16920846 NCBI chr11:101,367,716...101,377,903
Ensembl chr11:101,367,561...101,377,903 		JBrowse link
G Ivl involucrin decreases expression ISO tungstate results in decreased expression of IVL protein CTD PMID:7848924 NCBI chr 3:92,570,899...92,573,790
Ensembl chr 3:92,570,902...92,573,735 		JBrowse link
G Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 multiple interactions ISO PAPSS1 protein binds to and affects the metabolism of tungstate CTD PMID:15065880 NCBI chr 3:131,564,764...131,643,671
Ensembl chr 3:131,564,768...131,643,671 		JBrowse link
G Slc34a2 solute carrier family 34 (sodium phosphate), member 2 multiple interactions ISO tungstate promotes the reaction [Fructose results in decreased expression of SLC34A2 mRNA] CTD PMID:18400728 NCBI chr 5:53,049,353...53,071,664
Ensembl chr 5:53,038,081...53,071,664 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 21552
    chemical entity 21550
      molecular entity 21534
        transition element molecular entity 17219
          chromium group molecular entity 6672
            tungsten molecular entity 32
              elemental tungsten + 0
              tungsten coordination entity + 32
              tungsten oxide + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 21552
    subatomic particle 21537
      composite particle 21537
        hadron 21537
          baryon 21537
            nucleon 21537
              atomic nucleus 21537
                atom 21537
                  metal atom 18166
                    transition element atom 17561
                      d-block element atom 17548
                        chromium group element atom 7920
                          chromium group molecular entity 6672
                            tungsten molecular entity 32
                              elemental tungsten + 0
                              tungsten coordination entity + 32
                              tungsten oxide + 0
paths to the root