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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:ytterbium
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Accession:CHEBI:33381 term browser browse the term
Definition:A lanthanoid atom that has formula Yb.
Synonyms:related_synonym: 70Yb;   Formula=Yb;   InChI=1S/Yb;   InChIKey=NAWDYIZEMPQZHO-UHFFFAOYSA-N;   SMILES=[Yb];   Yb;   yterbio
 xref: CAS:7440-64-4;   Gmelin:16320
 xref_mesh: MESH:D015018
 xref: WebElements:Yb


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ytterbium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator increases expression ISO Ytterbium analog results in increased expression of BAX protein CTD PMID:19632212 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bcl2 BCL2, apoptosis regulator decreases expression ISO Ytterbium analog results in decreased expression of BCL2 protein CTD PMID:19632212 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G multiple interactions ISO Ytterbium inhibits the reaction [CACNA1G protein results in increased transport of Barium] CTD PMID:12163980 NCBI chr10:82,129,071...82,197,828
Ensembl chr10:82,129,506...82,197,848
JBrowse link
G Casp9 caspase 9 increases activity ISO Ytterbium analog results in increased activity of CASP9 protein CTD PMID:19632212 NCBI chr 5:160,356,211...160,373,774
Ensembl chr 5:160,355,833...160,373,778
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 increases cleavage ISO Ytterbium analog results in increased cleavage of PARP1 protein CTD PMID:19632212 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19775
    chemical entity 19775
      atom 19774
        metal atom 17364
          transition element atom 16855
            f-block element atom 812
              ytterbium 5
                ytterbium molecular entity + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19775
    subatomic particle 19774
      composite particle 19774
        hadron 19774
          baryon 19774
            nucleon 19774
              atomic nucleus 19774
                atom 19774
                  metal atom 17364
                    transition element atom 16855
                      rare earth metal atom 531
                        lanthanoid atom 531
                          ytterbium 5
                            ytterbium molecular entity + 0
paths to the root