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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:rubidium atom
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Accession:CHEBI:33322 term browser browse the term
Definition:An alkali metal atom that has formula Rb.
Synonyms:related_synonym: 37Rb;   Formula=Rb;   InChI=1S/Rb;   InChIKey=IGLNJRXAVVLDKE-UHFFFAOYSA-N;   Rb;   SMILES=[Rb];   rubidio;   rubidium
 xref: CAS:7440-17-7;   DrugBank:DB06749;   Gmelin:16244
 xref_mesh: MESH:D012413
 xref: WebElements:Rb


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rubidium atom term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 multiple interactions EXP
ISO
[KCNJ8 protein binds to ABCC8 protein] which results in increased export of Rubidium
[KCNJ11 protein binds to ABCC8 protein] which results in increased export of Rubidium
CTD PMID:28842488 NCBI chr 1:102,110,708...102,191,287
Ensembl chr 1:102,110,708...102,191,287
JBrowse link
G Abcc9 ATP binding cassette subfamily C member 9 multiple interactions EXP
ISO
[KCNJ8 protein binds to ABCC9 protein] which results in increased export of Rubidium
[KCNJ11 protein binds to ABCC9 protein] which results in increased export of Rubidium
CTD PMID:28842488 NCBI chr 4:176,806,098...176,928,540
Ensembl chr 4:176,805,431...176,922,424
JBrowse link
G Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit multiple interactions ISO [ATP12A protein co-treated with ATP4B protein] results in increased uptake of Rubidium; Ouabain inhibits the reaction [[ATP12A protein co-treated with ATP4B protein] results in increased uptake of Rubidium]; Sch 28080 inhibits the reaction [[ATP12A protein co-treated with ATP4B protein] results in increased uptake of Rubidium] CTD PMID:8853415 NCBI chr15:36,561,306...36,590,171
Ensembl chr15:36,565,495...36,590,171
JBrowse link
G Atp4b ATPase H+/K+ transporting subunit beta multiple interactions ISO [ATP12A protein co-treated with ATP4B protein] results in increased uptake of Rubidium; Ouabain inhibits the reaction [[ATP12A protein co-treated with ATP4B protein] results in increased uptake of Rubidium]; Sch 28080 inhibits the reaction [[ATP12A protein co-treated with ATP4B protein] results in increased uptake of Rubidium] CTD PMID:8853415 NCBI chr16:81,136,218...81,145,131
Ensembl chr16:81,136,218...81,145,131
JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 multiple interactions ISO Rubidium inhibits the reaction [Gramicidin results in decreased expression of KCNH2 protein modified form] CTD PMID:19139152 NCBI chr 4:7,355,066...7,387,282
Ensembl chr 4:7,355,574...7,387,253
JBrowse link
G Kcnj11 potassium inwardly-rectifying channel, subfamily J, member 11 multiple interactions ISO [KCNJ11 protein binds to ABCC8 protein] which results in increased export of Rubidium; [KCNJ11 protein binds to ABCC9 protein] which results in increased export of Rubidium CTD PMID:28842488 NCBI chr 1:102,103,093...102,107,134
Ensembl chr 1:102,103,094...102,106,127
JBrowse link
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 multiple interactions EXP [KCNJ8 protein binds to ABCC8 protein] which results in increased export of Rubidium; [KCNJ8 protein binds to ABCC9 protein] which results in increased export of Rubidium CTD PMID:28842488 NCBI chr 4:176,783,287...176,789,143
Ensembl chr 4:176,782,498...176,789,304
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 affects activity ISO Rubidium affects the activity of KCNMA1 protein CTD PMID:16636204 NCBI chr15:344,204...1,048,849
Ensembl chr15:344,360...1,047,956
JBrowse link
G Kcnq4 potassium voltage-gated channel subfamily Q member 4 multiple interactions ISO [ezogabine results in increased activity of KCNQ4 protein] which results in increased export of Rubidium CTD PMID:21782781 NCBI chr 5:139,625,783...139,677,300
Ensembl chr 5:139,627,576...139,677,300
JBrowse link
G Slc12a2 solute carrier family 12 member 2 multiple interactions
increases uptake
EXP
ISO
2-(2-amino-3-methoxyphenyl)-4H-1-benzopyran-4-one inhibits the reaction [Phenylephrine promotes the reaction [SLC12A2 protein results in increased uptake of Rubidium]]; [calyculin A results in increased phosphorylation of SLC12A2 protein] inhibits the reaction [Bumetanide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]]; Bumetanide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; Phenylephrine promotes the reaction [SLC12A2 protein results in increased uptake of Rubidium]
azosemide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; Bumetanide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; Ethacrynic Acid inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; Furosemide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; piretanide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; Ticrynafen inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; Torsemide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]
CTD PMID:14630635 PMID:29959396 NCBI chr18:52,917,124...52,985,281
Ensembl chr18:52,917,124...52,985,261
JBrowse link
G Trpc6 transient receptor potential cation channel, subfamily C, member 6 increases transport ISO TRPC6 protein results in increased transport of Rubidium CTD PMID:11179201 NCBI chr 8:6,811,543...6,917,534
Ensembl chr 8:6,811,543...6,917,535
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19770
    chemical entity 19770
      atom 19768
        metal atom 17283
          alkali metal atom 10667
            rubidium atom 11
              rubidium molecular entity + 0
              rubidium-87 atom 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19770
    subatomic particle 19768
      composite particle 19768
        hadron 19768
          baryon 19768
            nucleon 19768
              atomic nucleus 19768
                atom 19768
                  metal atom 17283
                    alkali metal atom 10667
                      rubidium atom 11
                        rubidium molecular entity + 0
                        rubidium-87 atom 0
paths to the root