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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:rubidium atom
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Accession:CHEBI:33322 term browser browse the term
Definition:An alkali metal atom that has formula Rb.
Synonyms:related_synonym: 37Rb;   Formula=Rb;   InChI=1S/Rb;   InChIKey=IGLNJRXAVVLDKE-UHFFFAOYSA-N;   Rb;   SMILES=[Rb];   rubidio;   rubidium
 xref: CAS:7440-17-7;   DrugBank:DB06749;   Gmelin:16244
 xref_mesh: MESH:D012413
 xref: WebElements:Rb



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rubidium atom term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 multiple interactions EXP
ISO
[KCNJ8 protein binds to ABCC8 protein] which results in increased export of Rubidium
[KCNJ11 protein binds to ABCC8 protein] which results in increased export of Rubidium
CTD PMID:28842488 NCBI chr 1:96,598,663...96,679,495
Ensembl chr 1:96,598,647...96,679,510
JBrowse link
G Abcc9 ATP binding cassette subfamily C member 9 multiple interactions EXP
ISO
[KCNJ8 protein binds to ABCC9 protein] which results in increased export of Rubidium
[KCNJ11 protein binds to ABCC9 protein] which results in increased export of Rubidium
CTD PMID:28842488 NCBI chr 4:175,531,854...175,655,849
Ensembl chr 4:175,532,547...175,655,356
JBrowse link
G Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit multiple interactions ISO [ATP12A protein co-treated with ATP4B protein] results in increased uptake of Rubidium; Ouabain inhibits the reaction [[ATP12A protein co-treated with ATP4B protein] results in increased uptake of Rubidium]; Sch 28080 inhibits the reaction [[ATP12A protein co-treated with ATP4B protein] results in increased uptake of Rubidium] CTD PMID:8853415 NCBI chr15:30,443,571...30,468,229
Ensembl chr15:30,443,571...30,468,229
JBrowse link
G Atp4b ATPase H+/K+ transporting subunit beta multiple interactions ISO [ATP12A protein co-treated with ATP4B protein] results in increased uptake of Rubidium; Ouabain inhibits the reaction [[ATP12A protein co-treated with ATP4B protein] results in increased uptake of Rubidium]; Sch 28080 inhibits the reaction [[ATP12A protein co-treated with ATP4B protein] results in increased uptake of Rubidium] CTD PMID:8853415 NCBI chr16:76,144,150...76,153,063
Ensembl chr16:76,144,150...76,153,063
JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 multiple interactions ISO Rubidium inhibits the reaction [Gramicidin results in decreased expression of KCNH2 protein modified form] CTD PMID:19139152 NCBI chr 4:10,826,834...10,859,009
Ensembl chr 4:10,826,928...10,859,008
JBrowse link
G Kcnj11 potassium inwardly-rectifying channel, subfamily J, member 11 multiple interactions ISO [KCNJ11 protein binds to ABCC8 protein] which results in increased export of Rubidium; [KCNJ11 protein binds to ABCC9 protein] which results in increased export of Rubidium CTD PMID:28842488 NCBI chr 1:96,591,048...96,594,574
Ensembl chr 1:96,591,049...96,594,082
JBrowse link
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 multiple interactions EXP [KCNJ8 protein binds to ABCC8 protein] which results in increased export of Rubidium; [KCNJ8 protein binds to ABCC9 protein] which results in increased export of Rubidium CTD PMID:28842488 NCBI chr 4:175,508,908...175,515,829
Ensembl chr 4:175,508,912...175,515,603
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 affects activity ISO Rubidium affects the activity of KCNMA1 protein CTD PMID:16636204 NCBI chr15:302,078...1,001,198
Ensembl chr15:302,214...1,001,198
JBrowse link
G Kcnq4 potassium voltage-gated channel subfamily Q member 4 multiple interactions ISO [ezogabine results in increased activity of KCNQ4 protein] which results in increased export of Rubidium CTD PMID:21782781 NCBI chr 5:134,275,145...134,326,992
Ensembl chr 5:134,275,934...134,326,932
JBrowse link
G Slc12a2 solute carrier family 12 member 2 multiple interactions
increases uptake
EXP
ISO
2-(2-amino-3-methoxyphenyl)-4H-1-benzopyran-4-one inhibits the reaction [Phenylephrine promotes the reaction [SLC12A2 protein results in increased uptake of Rubidium]]; [calyculin A results in increased phosphorylation of SLC12A2 protein] inhibits the reaction [Bumetanide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]]; Bumetanide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; Phenylephrine promotes the reaction [SLC12A2 protein results in increased uptake of Rubidium]
azosemide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; Bumetanide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; Ethacrynic Acid inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; Furosemide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; piretanide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; Ticrynafen inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]; Torsemide inhibits the reaction [SLC12A2 protein results in increased uptake of Rubidium]
CTD PMID:14630635 PMID:29959396 NCBI chr18:51,348,282...51,416,448
Ensembl chr18:51,348,302...51,416,440
JBrowse link
G Trpc6 transient receptor potential cation channel, subfamily C, member 6 increases transport ISO TRPC6 protein results in increased transport of Rubidium CTD PMID:11179201 NCBI chr 8:5,759,387...5,864,000
Ensembl chr 8:5,758,935...5,828,092
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20072
    chemical entity 20071
      atom 20071
        metal atom 17622
          alkali metal atom 11972
            rubidium atom 11
              rubidium molecular entity + 0
              rubidium-85 atom 0
              rubidium-87 atom 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 20072
    subatomic particle 20071
      composite particle 20071
        hadron 20071
          baryon 20071
            nucleon 20071
              atomic nucleus 20071
                atom 20071
                  metal atom 17622
                    alkali metal atom 11972
                      rubidium atom 11
                        rubidium molecular entity + 0
                        rubidium-85 atom 0
                        rubidium-87 atom 0
paths to the root