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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:calcium carbonate
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Accession:CHEBI:3311 term browser browse the term
Definition:A calcium salt with formula CCaO3.
Synonyms:exact_synonym: calcium trioxidocarbonate
 related_synonym: CaCO3;   Calciumcarbonat;   E 170;   Formula=CCaO3;   Formula=CO3.Ca;   InChI=1S/CH2O3.Ca/c2-1(3)4;/h(H2,2,3,4);/q;+2/p-2;   InChIKey=VTYYLEPIZMXCLO-UHFFFAOYSA-L;   Kalziumkarbonat;   Precipitated calcium carbonate;   SMILES=[Ca+2].C(=O)([O-])[O-];   calcium carbonate (1:1);   carbonate de calcium;   carbonato de calcio;   carbonic acid calcium salt (1:1);   kohlensaurer Kalk
 xref: BPDB:108;   CAS:471-34-1;   DrugBank:DB06724;   KEGG:C08129;   KEGG:D00932
 xref_mesh: MESH:D002119
 xref: PPDB:108;   Reaxys:8008338;   Wikipedia:Calcium_carbonate


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calcium carbonate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BGLAP bone gamma-carboxyglutamate protein decreases expression EXP Calcium Carbonate results in decreased expression of BGLAP protein CTD PMID:2027271 NCBI chr 1:156,242,184...156,243,317
Ensembl chr 1:156,242,184...156,243,317 		JBrowse link
G CAPN1 calpain 1 increases activity EXP Calcium Carbonate analog results in increased activity of CAPN1 protein CTD PMID:24412303 NCBI chr11:65,181,373...65,212,006
Ensembl chr11:65,180,566...65,212,006 		JBrowse link
G CASP3 caspase 3 increases activity EXP Calcium Carbonate analog results in increased activity of CASP3 protein CTD PMID:24412303 NCBI chr 4:184,627,696...184,649,447
Ensembl chr 4:184,627,696...184,650,062 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 increases expression EXP Calcium Carbonate analog results in increased expression of DDIT3 CTD PMID:24412303 NCBI chr12:57,516,588...57,520,517
Ensembl chr12:57,516,588...57,521,737 		JBrowse link
G PTH parathyroid hormone affects expression
decreases expression		 EXP Calcium Carbonate affects the expression of PTH protein
Calcium Carbonate results in decreased expression of PTH protein		 CTD PMID:1752077 PMID:2027271 PMID:3826069 PMID:7891547 PMID:8481062 More... NCBI chr11:13,492,054...13,496,181
Ensembl chr11:13,492,054...13,496,181 		JBrowse link
G PTHLH parathyroid hormone like hormone decreases expression EXP Calcium Carbonate results in decreased expression of PTHLH protein CTD PMID:16006300 NCBI chr12:27,958,084...27,972,733
Ensembl chr12:27,958,084...27,972,733 		JBrowse link
G SPP1 secreted phosphoprotein 1 decreases expression ISO Calcium Carbonate results in decreased expression of SPP1 protein CTD PMID:17977878 NCBI chr 4:87,975,714...87,983,411
Ensembl chr 4:87,975,667...87,983,532 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 26041
    role 25957
      application 25179
        agrochemical 17535
          fertilizer 14612
            calcium carbonate 7
              aragonite 0
              calcite 0
              vaterite 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 26041
    subatomic particle 26016
      composite particle 26016
        hadron 26016
          baryon 26016
            nucleon 26016
              atomic nucleus 26016
                atom 26016
                  main group element atom 25841
                    p-block element atom 25841
                      carbon group element atom 25441
                        carbon atom 25399
                          organic molecular entity 25399
                            heteroorganic entity 24773
                              organochalcogen compound 24384
                                organooxygen compound 24061
                                  carbon oxoacid 22757
                                    carbonic acid 5757
                                      carbonates 139
                                        carbonate salt 26
                                          calcium carbonate 7
                                            aragonite 0
                                            calcite 0
                                            vaterite 0
paths to the root